Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP1B3P54709 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.14■□□□□ 0.65
ATP1B3P54709 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ATP1B3P54709 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP1B3P54709 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.14■□□□□ 0.65
ATP1B3P54709 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP1B3P54709 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
ATP1B3P54709 AL353803.4-201ENST00000565882 1934 ntBASIC19.13■□□□□ 0.65
ATP1B3P54709 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.13■□□□□ 0.65
ATP1B3P54709 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP1B3P54709 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATP1B3P54709 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP1B3P54709 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP1B3P54709 MIR6722-201ENST00000617286 78 ntBASIC19.13■□□□□ 0.65
ATP1B3P54709 AC005703.6-201ENST00000623265 1329 ntBASIC19.13■□□□□ 0.65
ATP1B3P54709 AC021242.3-201ENST00000607598 1377 ntBASIC19.13■□□□□ 0.65
ATP1B3P54709 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATP1B3P54709 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATP1B3P54709 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.12■□□□□ 0.65
ATP1B3P54709 AC007375.3-201ENST00000600936 2314 ntBASIC19.12■□□□□ 0.65
ATP1B3P54709 AC137767.1-201ENST00000602918 1920 ntBASIC19.12■□□□□ 0.65
ATP1B3P54709 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP1B3P54709 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.12■□□□□ 0.65
ATP1B3P54709 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP1B3P54709 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP1B3P54709 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP1B3P54709 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP1B3P54709 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.12■□□□□ 0.65
ATP1B3P54709 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP1B3P54709 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP1B3P54709 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ATP1B3P54709 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ATP1B3P54709 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ATP1B3P54709 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.12■□□□□ 0.65
ATP1B3P54709 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP1B3P54709 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.11■□□□□ 0.65
ATP1B3P54709 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP1B3P54709 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP1B3P54709 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP1B3P54709 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ATP1B3P54709 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP1B3P54709 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP1B3P54709 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP1B3P54709 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP1B3P54709 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ATP1B3P54709 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.11■□□□□ 0.65
ATP1B3P54709 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP1B3P54709 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
ATP1B3P54709 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP1B3P54709 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP1B3P54709 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP1B3P54709 AC144652.1-201ENST00000609974 1624 ntBASIC19.11■□□□□ 0.65
ATP1B3P54709 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP1B3P54709 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP1B3P54709 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.1■□□□□ 0.65
ATP1B3P54709 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP1B3P54709 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.1■□□□□ 0.65
ATP1B3P54709 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP1B3P54709 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP1B3P54709 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
ATP1B3P54709 ESRRAP2-201ENST00000418437 1549 ntBASIC19.1■□□□□ 0.65
ATP1B3P54709 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
ATP1B3P54709 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP1B3P54709 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP1B3P54709 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ATP1B3P54709 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP1B3P54709 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP1B3P54709 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ATP1B3P54709 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ATP1B3P54709 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP1B3P54709 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP1B3P54709 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP1B3P54709 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP1B3P54709 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP1B3P54709 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP1B3P54709 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP1B3P54709 AC127496.7-201ENST00000625110 1798 ntBASIC19.09■□□□□ 0.65
ATP1B3P54709 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.09■□□□□ 0.65
ATP1B3P54709 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.08■□□□□ 0.65
ATP1B3P54709 GUSBP5-202ENST00000510805 1989 ntBASIC19.08■□□□□ 0.65
ATP1B3P54709 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.08■□□□□ 0.65
ATP1B3P54709 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATP1B3P54709 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATP1B3P54709 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.08■□□□□ 0.64
ATP1B3P54709 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.08■□□□□ 0.64
ATP1B3P54709 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP1B3P54709 KRT125P-201ENST00000546827 989 ntBASIC19.08■□□□□ 0.64
ATP1B3P54709 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP1B3P54709 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP1B3P54709 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.08■□□□□ 0.64
ATP1B3P54709 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.08■□□□□ 0.64
ATP1B3P54709 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.08■□□□□ 0.64
ATP1B3P54709 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.08■□□□□ 0.64
ATP1B3P54709 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.08■□□□□ 0.64
ATP1B3P54709 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATP1B3P54709 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP1B3P54709 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ATP1B3P54709 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP1B3P54709 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATP1B3P54709 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms