Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
THBS3P49746 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THBS3P49746 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
THBS3P49746 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
THBS3P49746 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
THBS3P49746 AC233723.2-201ENST00000623798 2106 ntBASIC18.22■□□□□ 0.51
THBS3P49746 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THBS3P49746 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
THBS3P49746 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.22■□□□□ 0.51
THBS3P49746 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.22■□□□□ 0.51
THBS3P49746 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.22■□□□□ 0.51
THBS3P49746 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.22■□□□□ 0.51
THBS3P49746 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THBS3P49746 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
THBS3P49746 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THBS3P49746 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THBS3P49746 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THBS3P49746 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THBS3P49746 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.21■□□□□ 0.51
THBS3P49746 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
THBS3P49746 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
THBS3P49746 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.21■□□□□ 0.51
THBS3P49746 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
THBS3P49746 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.21■□□□□ 0.51
THBS3P49746 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.21■□□□□ 0.51
THBS3P49746 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
THBS3P49746 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
THBS3P49746 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.21■□□□□ 0.51
THBS3P49746 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
THBS3P49746 AL117328.2-201ENST00000624617 1940 ntBASIC18.21■□□□□ 0.51
THBS3P49746 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
THBS3P49746 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
THBS3P49746 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.2■□□□□ 0.5
THBS3P49746 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
THBS3P49746 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
THBS3P49746 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
THBS3P49746 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
THBS3P49746 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
THBS3P49746 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
THBS3P49746 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
THBS3P49746 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
THBS3P49746 MIR6722-201ENST00000617286 78 ntBASIC18.2■□□□□ 0.5
THBS3P49746 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.2■□□□□ 0.5
THBS3P49746 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.2■□□□□ 0.5
THBS3P49746 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
THBS3P49746 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
THBS3P49746 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
THBS3P49746 C1orf229-201ENST00000623686 2258 ntBASIC18.2■□□□□ 0.5
THBS3P49746 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
THBS3P49746 AC005703.6-201ENST00000623265 1329 ntBASIC18.2■□□□□ 0.5
THBS3P49746 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
THBS3P49746 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
THBS3P49746 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
THBS3P49746 AC021242.3-201ENST00000607598 1377 ntBASIC18.19■□□□□ 0.5
THBS3P49746 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
THBS3P49746 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
THBS3P49746 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
THBS3P49746 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
THBS3P49746 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.19■□□□□ 0.5
THBS3P49746 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.19■□□□□ 0.5
THBS3P49746 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.19■□□□□ 0.5
THBS3P49746 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
THBS3P49746 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.19■□□□□ 0.5
THBS3P49746 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
THBS3P49746 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
THBS3P49746 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.18■□□□□ 0.5
THBS3P49746 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
THBS3P49746 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
THBS3P49746 AL353803.4-201ENST00000565882 1934 ntBASIC18.18■□□□□ 0.5
THBS3P49746 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
THBS3P49746 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
THBS3P49746 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
THBS3P49746 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.18■□□□□ 0.5
THBS3P49746 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
THBS3P49746 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
THBS3P49746 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
THBS3P49746 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
THBS3P49746 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
THBS3P49746 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.18■□□□□ 0.5
THBS3P49746 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.18■□□□□ 0.5
THBS3P49746 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.18■□□□□ 0.5
THBS3P49746 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
THBS3P49746 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
THBS3P49746 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
THBS3P49746 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
THBS3P49746 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
THBS3P49746 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.17■□□□□ 0.5
THBS3P49746 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
THBS3P49746 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
THBS3P49746 UNC93B8-201ENST00000511903 705 ntBASIC18.17■□□□□ 0.5
THBS3P49746 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.17■□□□□ 0.5
THBS3P49746 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.17■□□□□ 0.5
THBS3P49746 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
THBS3P49746 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
THBS3P49746 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.17■□□□□ 0.5
THBS3P49746 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
THBS3P49746 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
THBS3P49746 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
THBS3P49746 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.17■□□□□ 0.5
THBS3P49746 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms