Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SRP9P49458 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SRP9P49458 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SRP9P49458 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SRP9P49458 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SRP9P49458 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SRP9P49458 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.52■□□□□ 0.72
SRP9P49458 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.52■□□□□ 0.72
SRP9P49458 AC004448.1-201ENST00000458332 883 ntBASIC19.52■□□□□ 0.72
SRP9P49458 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.52■□□□□ 0.72
SRP9P49458 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SRP9P49458 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SRP9P49458 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SRP9P49458 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SRP9P49458 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.52■□□□□ 0.71
SRP9P49458 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
SRP9P49458 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
SRP9P49458 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRP9P49458 AC131274.2-201ENST00000580697 1507 ntBASIC19.51■□□□□ 0.71
SRP9P49458 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRP9P49458 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRP9P49458 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SRP9P49458 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SRP9P49458 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRP9P49458 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.51■□□□□ 0.71
SRP9P49458 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SRP9P49458 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SRP9P49458 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRP9P49458 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SRP9P49458 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.51■□□□□ 0.71
SRP9P49458 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.51■□□□□ 0.71
SRP9P49458 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRP9P49458 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRP9P49458 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRP9P49458 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRP9P49458 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRP9P49458 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRP9P49458 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.51■□□□□ 0.71
SRP9P49458 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRP9P49458 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRP9P49458 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SRP9P49458 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.5■□□□□ 0.71
SRP9P49458 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SRP9P49458 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SRP9P49458 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.5■□□□□ 0.71
SRP9P49458 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRP9P49458 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SRP9P49458 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.5■□□□□ 0.71
SRP9P49458 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SRP9P49458 MTDHP2-201ENST00000601468 714 ntBASIC19.5■□□□□ 0.71
SRP9P49458 SNX5-217ENST00000606557 1087 ntBASIC19.5■□□□□ 0.71
SRP9P49458 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.5■□□□□ 0.71
SRP9P49458 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.5■□□□□ 0.71
SRP9P49458 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRP9P49458 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.5■□□□□ 0.71
SRP9P49458 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRP9P49458 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SRP9P49458 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SRP9P49458 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SRP9P49458 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRP9P49458 AC242852.2-201ENST00000615738 1807 ntBASIC19.49■□□□□ 0.71
SRP9P49458 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRP9P49458 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRP9P49458 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRP9P49458 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRP9P49458 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
SRP9P49458 GUSBP5-201ENST00000418136 578 ntBASIC19.49■□□□□ 0.71
SRP9P49458 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRP9P49458 TSPY9P-201ENST00000440215 945 ntBASIC19.49■□□□□ 0.71
SRP9P49458 TSPY11P-201ENST00000442607 1045 ntBASIC19.49■□□□□ 0.71
SRP9P49458 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.49■□□□□ 0.71
SRP9P49458 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.49■□□□□ 0.71
SRP9P49458 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.49■□□□□ 0.71
SRP9P49458 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SRP9P49458 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRP9P49458 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRP9P49458 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.49■□□□□ 0.71
SRP9P49458 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRP9P49458 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.49■□□□□ 0.71
SRP9P49458 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SRP9P49458 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRP9P49458 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SRP9P49458 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SRP9P49458 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.48■□□□□ 0.71
SRP9P49458 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SRP9P49458 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRP9P49458 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRP9P49458 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.48■□□□□ 0.71
SRP9P49458 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.48■□□□□ 0.71
SRP9P49458 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
SRP9P49458 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.48■□□□□ 0.71
SRP9P49458 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRP9P49458 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRP9P49458 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRP9P49458 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.47■□□□□ 0.71
SRP9P49458 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRP9P49458 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SRP9P49458 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SRP9P49458 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.47■□□□□ 0.71
SRP9P49458 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms