Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 TUB3YML124C 1338 nt4.56□□□□□ -1.68
UPF3P48412 RPC53YDL150W 1269 nt4.56□□□□□ -1.68
UPF3P48412 ARO2YGL148W 1131 nt4.56□□□□□ -1.68
UPF3P48412 COS12YGL263W 1143 nt4.56□□□□□ -1.68
UPF3P48412 MRP4YHL004W 1185 nt4.56□□□□□ -1.68
UPF3P48412 FMC1YIL098C 468 nt4.56□□□□□ -1.68
UPF3P48412 DID4YKL002W 699 nt4.56□□□□□ -1.68
UPF3P48412 GPI2YPL076W 843 nt4.56□□□□□ -1.68
UPF3P48412 RRB1YMR131C 1536 nt4.56□□□□□ -1.68
UPF3P48412 NOP8YOL144W 1455 nt4.56□□□□□ -1.68
UPF3P48412 BUD6YLR319C 2367 nt4.55□□□□□ -1.68
UPF3P48412 YFT2YDR319C 825 nt4.55□□□□□ -1.68
UPF3P48412 YDR391CYDR391C 699 nt4.55□□□□□ -1.68
UPF3P48412 SRB5YGR104C 924 nt4.55□□□□□ -1.68
UPF3P48412 RPL43BYJR094W-A 279 nt4.55□□□□□ -1.68
UPF3P48412 NIT3YLR351C 876 nt4.55□□□□□ -1.68
UPF3P48412 YNL144W-AYNL144W-A 84 nt4.55□□□□□ -1.68
UPF3P48412 YBR056W-AYBR056W-A 201 nt4.55□□□□□ -1.68
UPF3P48412 MSA1YOR066W 1890 nt4.55□□□□□ -1.68
UPF3P48412 RCK2YLR248W 1833 nt4.55□□□□□ -1.68
UPF3P48412 TAF5YBR198C 2397 nt4.55□□□□□ -1.68
UPF3P48412 IMA3YIL172C 1770 nt4.55□□□□□ -1.68
UPF3P48412 IMA4YJL221C 1770 nt4.55□□□□□ -1.68
UPF3P48412 YMR196WYMR196W 3267 nt4.54□□□□□ -1.68
UPF3P48412 TRE2YOR256C 2430 nt4.54□□□□□ -1.68
UPF3P48412 RAD30YDR419W 1899 nt4.54□□□□□ -1.68
UPF3P48412 EUG1YDR518W 1554 nt4.54□□□□□ -1.68
UPF3P48412 YHL049CYHL049C 816 nt4.54□□□□□ -1.68
UPF3P48412 YBL006W-AYBL006W-A 150 nt4.54□□□□□ -1.68
UPF3P48412 YML119WYML119W 1074 nt4.54□□□□□ -1.68
UPF3P48412 COG5YNL051W 1212 nt4.54□□□□□ -1.68
UPF3P48412 PNT1YOR266W 1272 nt4.54□□□□□ -1.68
UPF3P48412 MDM34YGL219C 1380 nt4.53□□□□□ -1.68
UPF3P48412 GMC1YDR506C 1827 nt4.53□□□□□ -1.68
UPF3P48412 SLX8YER116C 825 nt4.53□□□□□ -1.68
UPF3P48412 LAC1YKL008C 1257 nt4.53□□□□□ -1.68
UPF3P48412 YMR178WYMR178W 825 nt4.53□□□□□ -1.68
UPF3P48412 AAH1YNL141W 1044 nt4.53□□□□□ -1.68
UPF3P48412 POP3YNL282W 588 nt4.53□□□□□ -1.68
UPF3P48412 TIF4632YGL049C 2745 nt4.53□□□□□ -1.68
UPF3P48412 CTK1YKL139W 1587 nt4.53□□□□□ -1.69
UPF3P48412 PEX29YDR479C 1665 nt4.52□□□□□ -1.69
UPF3P48412 SSB2YNL209W 1842 nt4.52□□□□□ -1.69
UPF3P48412 KEG1YFR042W 603 nt4.52□□□□□ -1.69
UPF3P48412 PRE9YGR135W 777 nt4.52□□□□□ -1.69
UPF3P48412 VPS29YHR012W 849 nt4.52□□□□□ -1.69
UPF3P48412 WSS1YHR134W 810 nt4.52□□□□□ -1.69
UPF3P48412 YAR019W-AYAR019W-A 333 nt4.52□□□□□ -1.69
UPF3P48412 RRN9YMR270C 1098 nt4.52□□□□□ -1.69
UPF3P48412 YBL059WYBL059W 582 nt4.52□□□□□ -1.69
UPF3P48412 FEX1YOR390W 1128 nt4.52□□□□□ -1.69
UPF3P48412 FEX2YPL279C 1128 nt4.52□□□□□ -1.69
UPF3P48412 TRM1YDR120C 1713 nt4.52□□□□□ -1.69
UPF3P48412 BOP2YLR267W 1713 nt4.52□□□□□ -1.69
UPF3P48412 MGR3YMR115W 1506 nt4.51□□□□□ -1.69
UPF3P48412 IPI3YNL182C 1668 nt4.51□□□□□ -1.69
UPF3P48412 AIM6YDL237W 1173 nt4.51□□□□□ -1.69
UPF3P48412 HNT2YDR305C 654 nt4.51□□□□□ -1.69
UPF3P48412 CLC1YGR167W 702 nt4.51□□□□□ -1.69
UPF3P48412 ECM34YHL043W 513 nt4.51□□□□□ -1.69
UPF3P48412 BNA1YJR025C 534 nt4.51□□□□□ -1.69
UPF3P48412 SHE1YBL031W 1017 nt4.51□□□□□ -1.69
UPF3P48412 IBD2YNL164C 1056 nt4.51□□□□□ -1.69
UPF3P48412 TEX1YNL253W 1269 nt4.51□□□□□ -1.69
UPF3P48412 VPS68YOL129W 555 nt4.51□□□□□ -1.69
UPF3P48412 NCE102YPR149W 522 nt4.51□□□□□ -1.69
UPF3P48412 snR19snR19 568 nt4.51□□□□□ -1.69
UPF3P48412 NMD3YHR170W 1557 nt4.51□□□□□ -1.69
UPF3P48412 CTR86YCR054C 1692 nt4.51□□□□□ -1.69
UPF3P48412 THI20YOL055C 1656 nt4.51□□□□□ -1.69
UPF3P48412 PRP28YDR243C 1767 nt4.5□□□□□ -1.69
UPF3P48412 RTC5YOR118W 1704 nt4.5□□□□□ -1.69
UPF3P48412 TRM44YPL030W 1704 nt4.5□□□□□ -1.69
UPF3P48412 NBP2YDR162C 711 nt4.5□□□□□ -1.69
UPF3P48412 YDR336WYDR336W 945 nt4.5□□□□□ -1.69
UPF3P48412 DCV1YFR012W 609 nt4.5□□□□□ -1.69
UPF3P48412 JAC1YGL018C 555 nt4.5□□□□□ -1.69
UPF3P48412 TOS8YGL096W 831 nt4.5□□□□□ -1.69
UPF3P48412 COS8YHL048W 1146 nt4.5□□□□□ -1.69
UPF3P48412 YUH1YJR099W 711 nt4.5□□□□□ -1.69
UPF3P48412 YIM1YMR152W 1098 nt4.5□□□□□ -1.69
UPF3P48412 CTL1YMR180C 963 nt4.5□□□□□ -1.69
UPF3P48412 YGK3YOL128C 1128 nt4.5□□□□□ -1.69
UPF3P48412 RAD28YDR030C 1521 nt4.5□□□□□ -1.69
UPF3P48412 UBP6YFR010W 1500 nt4.5□□□□□ -1.69
UPF3P48412 YLR345WYLR345W 1530 nt4.5□□□□□ -1.69
UPF3P48412 GLO3YER122C 1482 nt4.49□□□□□ -1.69
UPF3P48412 MEF1YLR069C 2286 nt4.49□□□□□ -1.69
UPF3P48412 FAA1YOR317W 2103 nt4.49□□□□□ -1.69
UPF3P48412 SMP3YOR149C 1551 nt4.49□□□□□ -1.69
UPF3P48412 DDI2YFL061W 678 nt4.49□□□□□ -1.69
UPF3P48412 YGL258W-AYGL258W-A 234 nt4.49□□□□□ -1.69
UPF3P48412 TFA2YKR062W 987 nt4.49□□□□□ -1.69
UPF3P48412 YAL069WYAL069W 315 nt4.49□□□□□ -1.69
UPF3P48412 PSY3YLR376C 729 nt4.49□□□□□ -1.69
UPF3P48412 SLZ1YNL196C 897 nt4.49□□□□□ -1.69
UPF3P48412 DDI3YNL335W 678 nt4.49□□□□□ -1.69
UPF3P48412 YCL021W-AYCL021W-A 378 nt4.49□□□□□ -1.69
UPF3P48412 APC4YDR118W 1959 nt4.49□□□□□ -1.69
UPF3P48412 SHU2YDR078C 672 nt4.48□□□□□ -1.69
Retrieved 100 of 7,029 protein–RNA pairs in 18.7 ms