Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 YBR089WYBR089W 600 nt4.27□□□□□ -1.73
RPH1P39956 RAD1YPL022W 3303 nt4.26□□□□□ -1.73
RPH1P39956 STB3YDR169C 1542 nt4.26□□□□□ -1.73
RPH1P39956 VID28YIL017C 2766 nt4.26□□□□□ -1.73
RPH1P39956 CMK1YFR014C 1341 nt4.26□□□□□ -1.73
RPH1P39956 PCL2YDL127W 927 nt4.26□□□□□ -1.73
RPH1P39956 YDR445CYDR445C 408 nt4.26□□□□□ -1.73
RPH1P39956 YLR157W-DYLR157W-D 213 nt4.26□□□□□ -1.73
RPH1P39956 YOL166CYOL166C 339 nt4.26□□□□□ -1.73
RPH1P39956 IMD2YHR216W 1572 nt4.26□□□□□ -1.73
RPH1P39956 CYM1YDR430C 2970 nt4.26□□□□□ -1.73
RPH1P39956 PFK1YGR240C 2964 nt4.26□□□□□ -1.73
RPH1P39956 YIL001WYIL001W 1542 nt4.26□□□□□ -1.73
RPH1P39956 EAR1YMR171C 1653 nt4.26□□□□□ -1.73
RPH1P39956 YCF1YDR135C 4548 nt4.25□□□□□ -1.73
RPH1P39956 SKM1YOL113W 1968 nt4.25□□□□□ -1.73
RPH1P39956 VAC7YNL054W 3498 nt4.25□□□□□ -1.73
RPH1P39956 PER1YCR044C 1074 nt4.25□□□□□ -1.73
RPH1P39956 TCA17YEL048C 459 nt4.25□□□□□ -1.73
RPH1P39956 PXR1YGR280C 816 nt4.25□□□□□ -1.73
RPH1P39956 HRT3YLR097C 1035 nt4.25□□□□□ -1.73
RPH1P39956 YLR285C-AYLR285C-A 171 nt4.25□□□□□ -1.73
RPH1P39956 YMR082CYMR082C 357 nt4.25□□□□□ -1.73
RPH1P39956 MET4YNL103W 2019 nt4.25□□□□□ -1.73
RPH1P39956 XKS1YGR194C 1803 nt4.25□□□□□ -1.73
RPH1P39956 MDM30YLR368W 1797 nt4.25□□□□□ -1.73
RPH1P39956 YCR016WYCR016W 873 nt4.24□□□□□ -1.73
RPH1P39956 PTC1YDL006W 846 nt4.24□□□□□ -1.73
RPH1P39956 TIM21YGR033C 720 nt4.24□□□□□ -1.73
RPH1P39956 YLR169WYLR169W 354 nt4.24□□□□□ -1.73
RPH1P39956 CDA2YLR308W 939 nt4.24□□□□□ -1.73
RPH1P39956 YLR374CYLR374C 390 nt4.24□□□□□ -1.73
RPH1P39956 ERV41YML067C 1059 nt4.24□□□□□ -1.73
RPH1P39956 RPL15BYMR121C 615 nt4.24□□□□□ -1.73
RPH1P39956 PRR2YDL214C 2100 nt4.24□□□□□ -1.73
RPH1P39956 JHD2YJR119C 2187 nt4.23□□□□□ -1.73
RPH1P39956 RAD7YJR052W 1698 nt4.23□□□□□ -1.73
RPH1P39956 VHS3YOR054C 2025 nt4.23□□□□□ -1.73
RPH1P39956 IMA3YIL172C 1770 nt4.23□□□□□ -1.73
RPH1P39956 IMA4YJL221C 1770 nt4.23□□□□□ -1.73
RPH1P39956 tL(UAG)JtL(UAG)J 82 nt4.23□□□□□ -1.73
RPH1P39956 tL(UAG)L1tL(UAG)L1 82 nt4.23□□□□□ -1.73
RPH1P39956 tL(UAG)L2tL(UAG)L2 82 nt4.23□□□□□ -1.73
RPH1P39956 TFA2YKR062W 987 nt4.23□□□□□ -1.73
RPH1P39956 YMR178WYMR178W 825 nt4.23□□□□□ -1.73
RPH1P39956 TFB6YOR352W 1032 nt4.23□□□□□ -1.73
RPH1P39956 RAD57YDR004W 1383 nt4.23□□□□□ -1.73
RPH1P39956 RTG3YBL103C 1461 nt4.23□□□□□ -1.73
RPH1P39956 HOM3YER052C 1584 nt4.23□□□□□ -1.73
RPH1P39956 LYS2YBR115C 4179 nt4.22□□□□□ -1.73
RPH1P39956 snR63snR63 255 nt4.22□□□□□ -1.73
RPH1P39956 ENT5YDR153C 1236 nt4.22□□□□□ -1.73
RPH1P39956 ARI1YGL157W 1044 nt4.22□□□□□ -1.73
RPH1P39956 YGR204C-AYGR204C-A 114 nt4.22□□□□□ -1.73
RPH1P39956 YHR112CYHR112C 1137 nt4.22□□□□□ -1.73
RPH1P39956 YIL089WYIL089W 618 nt4.22□□□□□ -1.73
RPH1P39956 YIL152WYIL152W 708 nt4.22□□□□□ -1.73
RPH1P39956 FBP1YLR377C 1047 nt4.22□□□□□ -1.73
RPH1P39956 YLR407WYLR407W 687 nt4.22□□□□□ -1.73
RPH1P39956 SEC65YML105C 822 nt4.22□□□□□ -1.73
RPH1P39956 SPN1YPR133C 1233 nt4.22□□□□□ -1.73
RPH1P39956 EFM2YBR271W 1260 nt4.22□□□□□ -1.73
RPH1P39956 PRP31YGR091W 1485 nt4.22□□□□□ -1.73
RPH1P39956 GAS2YLR343W 1668 nt4.22□□□□□ -1.73
RPH1P39956 YND1YER005W 1893 nt4.22□□□□□ -1.73
RPH1P39956 MRPL32YCR003W 552 nt4.21□□□□□ -1.74
RPH1P39956 POP6YGR030C 477 nt4.21□□□□□ -1.74
RPH1P39956 YGR168CYGR168C 1131 nt4.21□□□□□ -1.74
RPH1P39956 PAU17YLL025W 375 nt4.21□□□□□ -1.74
RPH1P39956 DCP1YOL149W 696 nt4.21□□□□□ -1.74
RPH1P39956 snR3snR3 194 nt4.21□□□□□ -1.74
RPH1P39956 SRO7YPR032W 3102 nt4.21□□□□□ -1.74
RPH1P39956 KAR5YMR065W 1515 nt4.21□□□□□ -1.74
RPH1P39956 YPK9YOR291W 4419 nt4.2□□□□□ -1.74
RPH1P39956 LDB17YDL146W 1476 nt4.2□□□□□ -1.74
RPH1P39956 DOS2YDR068W 933 nt4.2□□□□□ -1.74
RPH1P39956 RPS4BYHR203C 786 nt4.2□□□□□ -1.74
RPH1P39956 LOH1YJL038C 660 nt4.2□□□□□ -1.74
RPH1P39956 RPS4AYJR145C 786 nt4.2□□□□□ -1.74
RPH1P39956 YKR047WYKR047W 306 nt4.2□□□□□ -1.74
RPH1P39956 SPC3YLR066W 555 nt4.2□□□□□ -1.74
RPH1P39956 YBL036CYBL036C 774 nt4.2□□□□□ -1.74
RPH1P39956 AAH1YNL141W 1044 nt4.2□□□□□ -1.74
RPH1P39956 YOR008W-BYOR008W-B 102 nt4.2□□□□□ -1.74
RPH1P39956 SPC105YGL093W 2754 nt4.2□□□□□ -1.74
RPH1P39956 ADY3YDL239C 2373 nt4.2□□□□□ -1.74
RPH1P39956 ECM32YER176W 3366 nt4.19□□□□□ -1.74
RPH1P39956 PEX30YLR324W 1572 nt4.19□□□□□ -1.74
RPH1P39956 IBA57YJR122W 1494 nt4.19□□□□□ -1.74
RPH1P39956 YFL041W-AYFL041W-A 192 nt4.19□□□□□ -1.74
RPH1P39956 ELF1YKL160W 438 nt4.19□□□□□ -1.74
RPH1P39956 RFU1YLR073C 603 nt4.19□□□□□ -1.74
RPH1P39956 PRM9YAR031W 897 nt4.19□□□□□ -1.74
RPH1P39956 EMG1YLR186W 759 nt4.19□□□□□ -1.74
RPH1P39956 CDC42YLR229C 576 nt4.19□□□□□ -1.74
RPH1P39956 YML031C-AYML031C-A 336 nt4.19□□□□□ -1.74
RPH1P39956 RPN8YOR261C 1017 nt4.19□□□□□ -1.74
RPH1P39956 YCL022CYCL022C 516 nt4.19□□□□□ -1.74
RPH1P39956 RRI1YDL216C 1323 nt4.19□□□□□ -1.74
RPH1P39956 TRM11YOL124C 1302 nt4.19□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms