Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
SCNN1AP37088 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
SCNN1AP37088 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.15■■□□□ 1.3
SCNN1AP37088 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SCNN1AP37088 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SCNN1AP37088 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SCNN1AP37088 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.15■■□□□ 1.3
SCNN1AP37088 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
SCNN1AP37088 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.14■■□□□ 1.3
SCNN1AP37088 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.14■■□□□ 1.3
SCNN1AP37088 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
SCNN1AP37088 ESRRAP2-201ENST00000418437 1549 ntBASIC23.14■■□□□ 1.3
SCNN1AP37088 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.14■■□□□ 1.3
SCNN1AP37088 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SCNN1AP37088 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SCNN1AP37088 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SCNN1AP37088 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.14■■□□□ 1.29
SCNN1AP37088 AC136469.2-201ENST00000623944 1028 ntBASIC23.14■■□□□ 1.29
SCNN1AP37088 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SCNN1AP37088 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SCNN1AP37088 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
SCNN1AP37088 C9orf163-202ENST00000624034 2573 ntBASIC23.13■■□□□ 1.29
SCNN1AP37088 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SCNN1AP37088 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SCNN1AP37088 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
SCNN1AP37088 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
SCNN1AP37088 OR2I1P-207ENST00000453522 948 ntBASIC23.13■■□□□ 1.29
SCNN1AP37088 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.13■■□□□ 1.29
SCNN1AP37088 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
SCNN1AP37088 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
SCNN1AP37088 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SCNN1AP37088 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.13■■□□□ 1.29
SCNN1AP37088 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SCNN1AP37088 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SCNN1AP37088 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SCNN1AP37088 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
SCNN1AP37088 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.12■■□□□ 1.29
SCNN1AP37088 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.12■■□□□ 1.29
SCNN1AP37088 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SCNN1AP37088 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SCNN1AP37088 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
SCNN1AP37088 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
SCNN1AP37088 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SCNN1AP37088 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SCNN1AP37088 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
SCNN1AP37088 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.11■■□□□ 1.29
SCNN1AP37088 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.11■■□□□ 1.29
SCNN1AP37088 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.11■■□□□ 1.29
SCNN1AP37088 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.11■■□□□ 1.29
SCNN1AP37088 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SCNN1AP37088 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SCNN1AP37088 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
SCNN1AP37088 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.11■■□□□ 1.29
SCNN1AP37088 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.11■■□□□ 1.29
SCNN1AP37088 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.11■■□□□ 1.29
SCNN1AP37088 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SCNN1AP37088 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SCNN1AP37088 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.11■■□□□ 1.29
SCNN1AP37088 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
SCNN1AP37088 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCNN1AP37088 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SCNN1AP37088 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SCNN1AP37088 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCNN1AP37088 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SCNN1AP37088 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCNN1AP37088 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
SCNN1AP37088 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.1■■□□□ 1.29
SCNN1AP37088 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.1■■□□□ 1.29
SCNN1AP37088 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.1■■□□□ 1.29
SCNN1AP37088 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SCNN1AP37088 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.09■■□□□ 1.29
SCNN1AP37088 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SCNN1AP37088 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.09■■□□□ 1.29
SCNN1AP37088 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SCNN1AP37088 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
SCNN1AP37088 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SCNN1AP37088 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SCNN1AP37088 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.09■■□□□ 1.29
SCNN1AP37088 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.08■■□□□ 1.29
SCNN1AP37088 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SCNN1AP37088 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SCNN1AP37088 UNC93B3-201ENST00000308076 687 ntBASIC23.08■■□□□ 1.29
SCNN1AP37088 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.08■■□□□ 1.29
SCNN1AP37088 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.08■■□□□ 1.29
SCNN1AP37088 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.08■■□□□ 1.29
SCNN1AP37088 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SCNN1AP37088 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SCNN1AP37088 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SCNN1AP37088 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SCNN1AP37088 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
SCNN1AP37088 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SCNN1AP37088 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SCNN1AP37088 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SCNN1AP37088 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SCNN1AP37088 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SCNN1AP37088 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SCNN1AP37088 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SCNN1AP37088 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SCNN1AP37088 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SCNN1AP37088 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms