Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LCN1P31025 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LCN1P31025 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.44■□□□□ 0.86
LCN1P31025 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
LCN1P31025 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.44■□□□□ 0.86
LCN1P31025 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LCN1P31025 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LCN1P31025 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LCN1P31025 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.44■□□□□ 0.86
LCN1P31025 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LCN1P31025 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LCN1P31025 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LCN1P31025 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LCN1P31025 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.43■□□□□ 0.86
LCN1P31025 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.43■□□□□ 0.86
LCN1P31025 DUX4L19-201ENST00000557448 1267 ntBASIC20.43■□□□□ 0.86
LCN1P31025 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LCN1P31025 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.43■□□□□ 0.86
LCN1P31025 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LCN1P31025 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LCN1P31025 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.42■□□□□ 0.86
LCN1P31025 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LCN1P31025 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LCN1P31025 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LCN1P31025 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.42■□□□□ 0.86
LCN1P31025 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.42■□□□□ 0.86
LCN1P31025 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LCN1P31025 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LCN1P31025 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
LCN1P31025 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LCN1P31025 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.42■□□□□ 0.86
LCN1P31025 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LCN1P31025 AC131281.2-201ENST00000520478 145 ntBASIC20.41■□□□□ 0.86
LCN1P31025 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.41■□□□□ 0.86
LCN1P31025 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.41■□□□□ 0.86
LCN1P31025 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.41■□□□□ 0.86
LCN1P31025 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LCN1P31025 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
LCN1P31025 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.41■□□□□ 0.86
LCN1P31025 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.41■□□□□ 0.86
LCN1P31025 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.41■□□□□ 0.86
LCN1P31025 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LCN1P31025 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LCN1P31025 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
LCN1P31025 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LCN1P31025 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LCN1P31025 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LCN1P31025 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LCN1P31025 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LCN1P31025 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LCN1P31025 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
LCN1P31025 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LCN1P31025 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LCN1P31025 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.4■□□□□ 0.86
LCN1P31025 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
LCN1P31025 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LCN1P31025 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.4■□□□□ 0.86
LCN1P31025 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.4■□□□□ 0.86
LCN1P31025 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.39■□□□□ 0.86
LCN1P31025 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LCN1P31025 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
LCN1P31025 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
LCN1P31025 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LCN1P31025 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LCN1P31025 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LCN1P31025 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.39■□□□□ 0.85
LCN1P31025 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LCN1P31025 AC099791.2-201ENST00000605725 427 ntBASIC20.39■□□□□ 0.85
LCN1P31025 MIR4466-201ENST00000606121 54 ntBASIC20.39■□□□□ 0.85
LCN1P31025 AL138724.1-201ENST00000606771 1088 ntBASIC20.39■□□□□ 0.85
LCN1P31025 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LCN1P31025 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LCN1P31025 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
LCN1P31025 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.38■□□□□ 0.85
LCN1P31025 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LCN1P31025 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LCN1P31025 AC131212.1-201ENST00000613771 668 ntBASIC20.38■□□□□ 0.85
LCN1P31025 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.38■□□□□ 0.85
LCN1P31025 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.38■□□□□ 0.85
LCN1P31025 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LCN1P31025 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LCN1P31025 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.37■□□□□ 0.85
LCN1P31025 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LCN1P31025 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LCN1P31025 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LCN1P31025 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
LCN1P31025 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LCN1P31025 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.37■□□□□ 0.85
LCN1P31025 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
LCN1P31025 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
LCN1P31025 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
LCN1P31025 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LCN1P31025 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LCN1P31025 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LCN1P31025 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.36■□□□□ 0.85
LCN1P31025 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LCN1P31025 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
LCN1P31025 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
LCN1P31025 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.36■□□□□ 0.85
LCN1P31025 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms