Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SHC1P29353 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SHC1P29353 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHC1P29353 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SHC1P29353 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHC1P29353 LINC00565-201ENST00000562710 2331 ntBASIC20.25■□□□□ 0.83
SHC1P29353 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHC1P29353 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHC1P29353 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHC1P29353 AC008406.3-201ENST00000620001 1374 ntBASIC20.24■□□□□ 0.83
SHC1P29353 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHC1P29353 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.24■□□□□ 0.83
SHC1P29353 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHC1P29353 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHC1P29353 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SHC1P29353 ANOS2P-203ENST00000472227 1816 ntBASIC20.24■□□□□ 0.83
SHC1P29353 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHC1P29353 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.24■□□□□ 0.83
SHC1P29353 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHC1P29353 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SHC1P29353 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SHC1P29353 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.23■□□□□ 0.83
SHC1P29353 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHC1P29353 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHC1P29353 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SHC1P29353 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SHC1P29353 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.22■□□□□ 0.83
SHC1P29353 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHC1P29353 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHC1P29353 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHC1P29353 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHC1P29353 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC1P29353 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHC1P29353 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHC1P29353 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.21■□□□□ 0.83
SHC1P29353 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC1P29353 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SHC1P29353 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.2■□□□□ 0.82
SHC1P29353 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHC1P29353 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHC1P29353 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHC1P29353 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.2■□□□□ 0.82
SHC1P29353 SRD5A1P1-201ENST00000442297 786 ntBASIC20.2■□□□□ 0.82
SHC1P29353 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.2■□□□□ 0.82
SHC1P29353 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.2■□□□□ 0.82
SHC1P29353 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHC1P29353 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.2■□□□□ 0.82
SHC1P29353 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHC1P29353 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHC1P29353 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHC1P29353 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.19■□□□□ 0.82
SHC1P29353 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.19■□□□□ 0.82
SHC1P29353 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.19■□□□□ 0.82
SHC1P29353 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHC1P29353 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.19■□□□□ 0.82
SHC1P29353 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHC1P29353 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.18■□□□□ 0.82
SHC1P29353 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.18■□□□□ 0.82
SHC1P29353 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC1P29353 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC1P29353 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC1P29353 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC1P29353 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC1P29353 AC144652.1-201ENST00000609974 1624 ntBASIC20.18■□□□□ 0.82
SHC1P29353 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.18■□□□□ 0.82
SHC1P29353 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SHC1P29353 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC1P29353 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHC1P29353 AC006455.2-201ENST00000429931 906 ntBASIC20.18■□□□□ 0.82
SHC1P29353 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHC1P29353 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
SHC1P29353 AC099791.2-201ENST00000605725 427 ntBASIC20.18■□□□□ 0.82
SHC1P29353 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.18■□□□□ 0.82
SHC1P29353 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC1P29353 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC1P29353 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC1P29353 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.17■□□□□ 0.82
SHC1P29353 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHC1P29353 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SHC1P29353 C1orf229-201ENST00000623686 2258 ntBASIC20.17■□□□□ 0.82
SHC1P29353 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHC1P29353 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHC1P29353 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHC1P29353 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHC1P29353 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SHC1P29353 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.17■□□□□ 0.82
SHC1P29353 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SHC1P29353 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHC1P29353 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.16■□□□□ 0.82
SHC1P29353 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SHC1P29353 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SHC1P29353 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SHC1P29353 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.16■□□□□ 0.82
SHC1P29353 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHC1P29353 AC092068.2-201ENST00000590491 1708 ntBASIC20.16■□□□□ 0.82
SHC1P29353 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHC1P29353 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SHC1P29353 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHC1P29353 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SHC1P29353 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms