Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.43■□□□□ 0.7
COL8A1P27658 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.43■□□□□ 0.7
COL8A1P27658 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.43■□□□□ 0.7
COL8A1P27658 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL8A1P27658 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
COL8A1P27658 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
COL8A1P27658 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL8A1P27658 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
COL8A1P27658 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
COL8A1P27658 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.42■□□□□ 0.7
COL8A1P27658 AC069152.1-201ENST00000438030 544 ntBASIC19.42■□□□□ 0.7
COL8A1P27658 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.42■□□□□ 0.7
COL8A1P27658 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL8A1P27658 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL8A1P27658 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.42■□□□□ 0.7
COL8A1P27658 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL8A1P27658 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL8A1P27658 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL8A1P27658 GUSBP6-202ENST00000438529 1198 ntBASIC19.41■□□□□ 0.7
COL8A1P27658 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.41■□□□□ 0.7
COL8A1P27658 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL8A1P27658 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL8A1P27658 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL8A1P27658 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL8A1P27658 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
COL8A1P27658 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL8A1P27658 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL8A1P27658 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL8A1P27658 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.4■□□□□ 0.7
COL8A1P27658 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
COL8A1P27658 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL8A1P27658 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL8A1P27658 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL8A1P27658 OR2I1P-207ENST00000453522 948 ntBASIC19.4■□□□□ 0.7
COL8A1P27658 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
COL8A1P27658 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.4■□□□□ 0.7
COL8A1P27658 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.4■□□□□ 0.7
COL8A1P27658 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL8A1P27658 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
COL8A1P27658 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
COL8A1P27658 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
COL8A1P27658 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL8A1P27658 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
COL8A1P27658 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL8A1P27658 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL8A1P27658 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL8A1P27658 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.39■□□□□ 0.7
COL8A1P27658 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL8A1P27658 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL8A1P27658 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL8A1P27658 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.39■□□□□ 0.69
COL8A1P27658 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
COL8A1P27658 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL8A1P27658 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL8A1P27658 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL8A1P27658 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL8A1P27658 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL8A1P27658 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL8A1P27658 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL8A1P27658 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
COL8A1P27658 KRT18P11-201ENST00000435214 1283 ntBASIC19.38■□□□□ 0.69
COL8A1P27658 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.38■□□□□ 0.69
COL8A1P27658 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.38■□□□□ 0.69
COL8A1P27658 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.38■□□□□ 0.69
COL8A1P27658 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL8A1P27658 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL8A1P27658 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
COL8A1P27658 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL8A1P27658 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL8A1P27658 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.37■□□□□ 0.69
COL8A1P27658 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.37■□□□□ 0.69
COL8A1P27658 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
COL8A1P27658 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COL8A1P27658 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
COL8A1P27658 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL8A1P27658 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COL8A1P27658 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL8A1P27658 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.37■□□□□ 0.69
COL8A1P27658 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
COL8A1P27658 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.37■□□□□ 0.69
COL8A1P27658 SLC7A5P2-201ENST00000553010 536 ntBASIC19.37■□□□□ 0.69
COL8A1P27658 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.37■□□□□ 0.69
COL8A1P27658 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.37■□□□□ 0.69
COL8A1P27658 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.37■□□□□ 0.69
COL8A1P27658 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.37■□□□□ 0.69
COL8A1P27658 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COL8A1P27658 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
COL8A1P27658 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL8A1P27658 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL8A1P27658 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL8A1P27658 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL8A1P27658 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL8A1P27658 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL8A1P27658 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL8A1P27658 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL8A1P27658 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL8A1P27658 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL8A1P27658 KRT18P29-201ENST00000397031 1267 ntBASIC19.36■□□□□ 0.69
COL8A1P27658 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.36■□□□□ 0.69
COL8A1P27658 MFSD11-216ENST00000590393 1141 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms