Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD40P25942 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.14■□□□□ 0.65
CD40P25942 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CD40P25942 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CD40P25942 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD40P25942 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD40P25942 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CD40P25942 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD40P25942 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD40P25942 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CD40P25942 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD40P25942 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD40P25942 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.13■□□□□ 0.65
CD40P25942 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD40P25942 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.12■□□□□ 0.65
CD40P25942 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CD40P25942 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD40P25942 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD40P25942 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.12■□□□□ 0.65
CD40P25942 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CD40P25942 AC004687.1-201ENST00000579003 1625 ntBASIC19.12■□□□□ 0.65
CD40P25942 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.12■□□□□ 0.65
CD40P25942 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD40P25942 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD40P25942 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.12■□□□□ 0.65
CD40P25942 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD40P25942 AP005435.1-201ENST00000529293 1178 ntBASIC19.12■□□□□ 0.65
CD40P25942 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.12■□□□□ 0.65
CD40P25942 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.12■□□□□ 0.65
CD40P25942 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
CD40P25942 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD40P25942 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.12■□□□□ 0.65
CD40P25942 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD40P25942 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD40P25942 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CD40P25942 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.11■□□□□ 0.65
CD40P25942 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.11■□□□□ 0.65
CD40P25942 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.11■□□□□ 0.65
CD40P25942 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD40P25942 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.11■□□□□ 0.65
CD40P25942 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.11■□□□□ 0.65
CD40P25942 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD40P25942 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD40P25942 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CD40P25942 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CD40P25942 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CD40P25942 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.1■□□□□ 0.65
CD40P25942 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD40P25942 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.1■□□□□ 0.65
CD40P25942 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD40P25942 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD40P25942 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CD40P25942 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CD40P25942 MIR5787-201ENST00000611784 55 ntBASIC19.1■□□□□ 0.65
CD40P25942 MIR6821-201ENST00000617625 74 ntBASIC19.1■□□□□ 0.65
CD40P25942 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CD40P25942 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
CD40P25942 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD40P25942 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD40P25942 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD40P25942 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD40P25942 ANOS2P-203ENST00000472227 1816 ntBASIC19.09■□□□□ 0.65
CD40P25942 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD40P25942 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.09■□□□□ 0.65
CD40P25942 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD40P25942 MIR572-201ENST00000384983 95 ntBASIC19.09■□□□□ 0.65
CD40P25942 AC097381.1-201ENST00000429019 1296 ntBASIC19.09■□□□□ 0.65
CD40P25942 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD40P25942 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.09■□□□□ 0.65
CD40P25942 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.09■□□□□ 0.65
CD40P25942 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CD40P25942 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CD40P25942 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD40P25942 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CD40P25942 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.08■□□□□ 0.65
CD40P25942 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CD40P25942 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CD40P25942 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
CD40P25942 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CD40P25942 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD40P25942 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.08■□□□□ 0.64
CD40P25942 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.08■□□□□ 0.64
CD40P25942 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD40P25942 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.08■□□□□ 0.64
CD40P25942 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.08■□□□□ 0.64
CD40P25942 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.08■□□□□ 0.64
CD40P25942 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
CD40P25942 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD40P25942 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.08■□□□□ 0.64
CD40P25942 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD40P25942 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD40P25942 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD40P25942 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.07■□□□□ 0.64
CD40P25942 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD40P25942 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.07■□□□□ 0.64
CD40P25942 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.07■□□□□ 0.64
CD40P25942 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.07■□□□□ 0.64
CD40P25942 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.07■□□□□ 0.64
CD40P25942 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.07■□□□□ 0.64
CD40P25942 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms