Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.02■□□□□ 0.96
MMP11P24347 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.02■□□□□ 0.96
MMP11P24347 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP11P24347 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP11P24347 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
MMP11P24347 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
MMP11P24347 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.02■□□□□ 0.95
MMP11P24347 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
MMP11P24347 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP11P24347 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
MMP11P24347 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
MMP11P24347 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP11P24347 AC099791.1-201ENST00000416440 715 ntBASIC21.01■□□□□ 0.95
MMP11P24347 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MMP11P24347 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.01■□□□□ 0.95
MMP11P24347 RARRES2P6-201ENST00000567333 442 ntBASIC21.01■□□□□ 0.95
MMP11P24347 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.01■□□□□ 0.95
MMP11P24347 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
MMP11P24347 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MMP11P24347 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MMP11P24347 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP11P24347 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MMP11P24347 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.01■□□□□ 0.95
MMP11P24347 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MMP11P24347 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.01■□□□□ 0.95
MMP11P24347 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
MMP11P24347 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
MMP11P24347 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MMP11P24347 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MMP11P24347 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
MMP11P24347 BX842568.3-201ENST00000418104 571 ntBASIC21■□□□□ 0.95
MMP11P24347 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
MMP11P24347 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21■□□□□ 0.95
MMP11P24347 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21■□□□□ 0.95
MMP11P24347 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21■□□□□ 0.95
MMP11P24347 AC233992.3-201ENST00000607491 485 ntBASIC21■□□□□ 0.95
MMP11P24347 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21■□□□□ 0.95
MMP11P24347 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MMP11P24347 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
MMP11P24347 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21■□□□□ 0.95
MMP11P24347 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21■□□□□ 0.95
MMP11P24347 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP11P24347 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP11P24347 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP11P24347 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.99■□□□□ 0.95
MMP11P24347 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.99■□□□□ 0.95
MMP11P24347 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MMP11P24347 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
MMP11P24347 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MMP11P24347 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP11P24347 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MMP11P24347 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP11P24347 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP11P24347 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP11P24347 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.98■□□□□ 0.95
MMP11P24347 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
MMP11P24347 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.98■□□□□ 0.95
MMP11P24347 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
MMP11P24347 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP11P24347 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.98■□□□□ 0.95
MMP11P24347 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MMP11P24347 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP11P24347 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP11P24347 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MMP11P24347 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.97■□□□□ 0.95
MMP11P24347 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MMP11P24347 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP11P24347 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MMP11P24347 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.97■□□□□ 0.95
MMP11P24347 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP11P24347 AC079834.2-201ENST00000609776 1949 ntBASIC20.97■□□□□ 0.95
MMP11P24347 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP11P24347 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP11P24347 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MMP11P24347 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MMP11P24347 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
MMP11P24347 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MMP11P24347 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.96■□□□□ 0.95
MMP11P24347 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP11P24347 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP11P24347 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP11P24347 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.96■□□□□ 0.95
MMP11P24347 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.96■□□□□ 0.95
MMP11P24347 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP11P24347 FP325331.1-202ENST00000623531 1380 ntBASIC20.96■□□□□ 0.95
MMP11P24347 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MMP11P24347 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP11P24347 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
MMP11P24347 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MMP11P24347 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
MMP11P24347 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP11P24347 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.95■□□□□ 0.94
MMP11P24347 AC026271.2-201ENST00000428091 497 ntBASIC20.95■□□□□ 0.94
MMP11P24347 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.95■□□□□ 0.94
MMP11P24347 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.95■□□□□ 0.94
MMP11P24347 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
MMP11P24347 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.95■□□□□ 0.94
MMP11P24347 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP11P24347 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP11P24347 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms