Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 AC006001.2-203ENST00000428557 304 ntTSL 313.23□□□□□ -0.296e-6■■□□□ 12.5
SFPQP23246 CMSS1-208ENST00000496116 2145 ntTSL 1 (best)12.67□□□□□ -0.386e-6■■□□□ 12.5
SFPQP23246 TULP4-201ENST00000367094 5170 ntTSL 1 (best) BASIC11.81□□□□□ -0.526e-6■■□□□ 12.5
SFPQP23246 CMSS1-201ENST00000421999 4330 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.656e-6■■□□□ 12.5
SFPQP23246 AL139383.1-201ENST00000454681 892 ntTSL 5 BASIC10.05□□□□□ -0.86e-6■■□□□ 12.5
SFPQP23246 IQGAP2-217ENST00000514350 2617 ntTSL 1 (best)9.86□□□□□ -0.836e-6■■□□□ 12.5
SFPQP23246 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.856e-6■■□□□ 12.5
SFPQP23246 CMSS1-206ENST00000491299 881 ntTSL 59.56□□□□□ -0.886e-6■■□□□ 12.5
SFPQP23246 AL360169.2-201ENST00000619713 561 ntTSL 5 BASIC9.51□□□□□ -0.896e-6■■□□□ 12.5
SFPQP23246 BCR-214ENST00000487679 231 ntTSL 1 (best)9.23□□□□□ -0.936e-6■■□□□ 12.5
SFPQP23246 ARID1B-233ENST00000637910 576 ntTSL 27.76□□□□□ -1.176e-6■■□□□ 12.5
SFPQP23246 ZEB1-216ENST00000559496 1381 ntTSL 1 (best)7.44□□□□□ -1.223e-7■■□□□ 12.5
SFPQP23246 ZEB1-210ENST00000557827 877 ntTSL 1 (best)7.2□□□□□ -1.263e-7■■□□□ 12.5
SFPQP23246 ZEB1-215ENST00000559476 1205 ntTSL 26.75□□□□□ -1.333e-7■■□□□ 12.5
SFPQP23246 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.396e-6■■□□□ 12.5
SFPQP23246 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.513e-7■■□□□ 12.5
SFPQP23246 ZEB1-207ENST00000493835 683 ntTSL 55.63□□□□□ -1.513e-7■■□□□ 12.5
SFPQP23246 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.48□□□□□ -1.536e-6■■□□□ 12.5
SFPQP23246 IMMP2L-209ENST00000489381 856 ntTSL 55.19□□□□□ -1.586e-6■■□□□ 12.5
SFPQP23246 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.07□□□□□ -1.66e-6■■□□□ 12.5
SFPQP23246 ZEB1-225ENST00000606671 571 ntTSL 44.53□□□□□ -1.683e-7■■□□□ 12.5
SFPQP23246 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.756e-6■■□□□ 12.5
SFPQP23246 ZEB1-224ENST00000606161 482 ntTSL 33.33□□□□□ -1.883e-7■■□□□ 12.5
SFPQP23246 SEPT9-245ENST00000592481 1291 ntTSL 522.84■■□□□ 1.259e-7■■□□□ 12.5
SFPQP23246 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.869e-7■■□□□ 12.5
SFPQP23246 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.411e-6■■□□□ 12.4
SFPQP23246 PTPRK-219ENST00000531050 2515 ntTSL 1 (best)8.98□□□□□ -0.977e-8■■□□□ 12.4
SFPQP23246 PVT1-217ENST00000523190 443 ntTSL 37.33□□□□□ -1.249e-7■■□□□ 12.4
SFPQP23246 COBLL1-213ENST00000456693 750 ntTSL 522.73■■□□□ 1.235e-7■■□□□ 12.4
SFPQP23246 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.965e-7■■□□□ 12.4
SFPQP23246 COBLL1-224ENST00000496396 944 ntTSL 1 (best)20.97■□□□□ 0.955e-7■■□□□ 12.4
SFPQP23246 COBLL1-210ENST00000448708 549 ntTSL 520.73■□□□□ 0.915e-7■■□□□ 12.4
SFPQP23246 COBLL1-206ENST00000434366 519 ntTSL 520.24■□□□□ 0.835e-7■■□□□ 12.4
SFPQP23246 COBLL1-205ENST00000414843 575 ntTSL 420.21■□□□□ 0.835e-7■■□□□ 12.4
SFPQP23246 COBLL1-219ENST00000491126 604 ntTSL 420.21■□□□□ 0.835e-7■■□□□ 12.4
SFPQP23246 COBLL1-217ENST00000483743 541 ntTSL 519.75■□□□□ 0.755e-7■■□□□ 12.4
SFPQP23246 COBLL1-209ENST00000445474 575 ntTSL 419.68■□□□□ 0.745e-7■■□□□ 12.4
SFPQP23246 COBLL1-208ENST00000444537 737 ntTSL 518.25■□□□□ 0.515e-7■■□□□ 12.4
SFPQP23246 COBLL1-212ENST00000456171 1793 ntTSL 218.12■□□□□ 0.495e-7■■□□□ 12.4
SFPQP23246 COBLL1-207ENST00000439313 565 ntTSL 517.14■□□□□ 0.335e-7■■□□□ 12.4
SFPQP23246 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.095e-7■■□□□ 12.4
SFPQP23246 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.095e-7■■□□□ 12.4
SFPQP23246 COBLL1-204ENST00000409184 4636 ntAPPRIS ALT2 TSL 1 (best)10.96□□□□□ -0.655e-7■■□□□ 12.4
SFPQP23246 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.95e-7■■□□□ 12.4
SFPQP23246 STARD13-209ENST00000567873 2037 ntTSL 1 (best)21.35■■□□□ 1.011e-7■■□□□ 12.4
SFPQP23246 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.091e-7■■□□□ 12.4
SFPQP23246 STARD13-206ENST00000487412 939 ntTSL 1 (best)11.25□□□□□ -0.611e-7■■□□□ 12.4
SFPQP23246 STARD13-208ENST00000498019 568 ntTSL 310.06□□□□□ -0.81e-7■■□□□ 12.4
SFPQP23246 GALNS-204ENST00000562831 609 ntTSL 327.41■■□□□ 1.982e-8■■□□□ 12.3
SFPQP23246 GALNS-207ENST00000565364 1075 ntTSL 1 (best)23.14■■□□□ 1.292e-8■■□□□ 12.3
SFPQP23246 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.222e-8■■□□□ 12.3
SFPQP23246 PAFAH1B1-210ENST00000575477 694 ntTSL 519.48■□□□□ 0.712e-8■■□□□ 12.3
SFPQP23246 GALNS-203ENST00000562593 5682 ntTSL 1 (best)19.02■□□□□ 0.642e-8■■□□□ 12.3
SFPQP23246 PAFAH1B1-211ENST00000576586 557 ntTSL 418.37■□□□□ 0.532e-8■■□□□ 12.3
SFPQP23246 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.482e-8■■□□□ 12.3
SFPQP23246 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.442e-8■■□□□ 12.3
SFPQP23246 GALNS-209ENST00000567525 1953 ntTSL 216.92■□□□□ 0.32e-8■■□□□ 12.3
SFPQP23246 PAFAH1B1-203ENST00000570400 661 ntTSL 315.51■□□□□ 0.072e-8■■□□□ 12.3
SFPQP23246 GALNS-212ENST00000568613 1804 ntTSL 214.36□□□□□ -0.112e-8■■□□□ 12.3
SFPQP23246 PAFAH1B1-204ENST00000571289 589 ntTSL 213.27□□□□□ -0.292e-8■■□□□ 12.3
SFPQP23246 PAFAH1B1-209ENST00000574816 662 ntTSL 56.1□□□□□ -1.432e-8■■□□□ 12.3
SFPQP23246 PLPP3-203ENST00000461655 646 ntTSL 35.86□□□□□ -1.472e-8■■□□□ 12.3
SFPQP23246 PAFAH1B1-206ENST00000572915 1361 ntTSL 1 (best)5.66□□□□□ -1.52e-8■■□□□ 12.3
SFPQP23246 PVT1-208ENST00000519481 542 ntTSL 212.21□□□□□ -0.453e-6■■□□□ 12.3
SFPQP23246 PVT1-209ENST00000520913 584 ntTSL 212.04□□□□□ -0.483e-6■■□□□ 12.3
SFPQP23246 PVT1-206ENST00000517838 518 ntTSL 28.15□□□□□ -1.13e-6■■□□□ 12.3
SFPQP23246 ANKRD11-211ENST00000566973 442 ntTSL 222.91■■□□□ 1.266e-7■■□□□ 12.3
SFPQP23246 ANKRD11-215ENST00000568512 294 ntTSL 29.94□□□□□ -0.826e-7■■□□□ 12.3
SFPQP23246 CDHR3-212ENST00000487084 834 ntTSL 324.96■■□□□ 1.596e-7■■□□□ 12.2
SFPQP23246 SLC2A14-216ENST00000542782 682 ntTSL 224.43■■□□□ 1.56e-7■■□□□ 12.2
SFPQP23246 SLC2A14-210ENST00000537557 578 ntTSL 323.16■■□□□ 1.36e-7■■□□□ 12.2
SFPQP23246 STAU1-208ENST00000437404 1085 ntTSL 1 (best)23■■□□□ 1.276e-7■■□□□ 12.2
SFPQP23246 CDHR3-207ENST00000470188 2199 ntTSL 222.94■■□□□ 1.266e-7■■□□□ 12.2
SFPQP23246 CDHR3-210ENST00000474330 1603 ntTSL 522.13■■□□□ 1.136e-7■■□□□ 12.2
SFPQP23246 ZNF331-212ENST00000509069 461 ntTSL 321.61■■□□□ 1.056e-7■■□□□ 12.2
SFPQP23246 SLC2A14-206ENST00000535344 561 ntTSL 420.31■□□□□ 0.846e-7■■□□□ 12.2
SFPQP23246 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.426e-7■■□□□ 12.2
SFPQP23246 SLC2A14-217ENST00000542916 580 ntTSL 416.69■□□□□ 0.266e-7■■□□□ 12.2
SFPQP23246 SLC2A14-219ENST00000544749 452 ntTSL 316.03■□□□□ 0.166e-7■■□□□ 12.2
SFPQP23246 SLC2A14-211ENST00000539234 440 ntTSL 516.03■□□□□ 0.166e-7■■□□□ 12.2
SFPQP23246 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC15.2■□□□□ 0.026e-7■■□□□ 12.2
SFPQP23246 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 06e-7■■□□□ 12.2
SFPQP23246 SLC2A14-208ENST00000535587 548 ntTSL 514.94□□□□□ -0.026e-7■■□□□ 12.2
SFPQP23246 SLC2A14-220ENST00000546234 854 ntTSL 214.08□□□□□ -0.166e-7■■□□□ 12.2
SFPQP23246 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.246e-7■■□□□ 12.2
SFPQP23246 STAU1-203ENST00000360426 3211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.266e-7■■□□□ 12.2
SFPQP23246 STAU1-202ENST00000347458 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.366e-7■■□□□ 12.2
SFPQP23246 STAU1-204ENST00000371792 3130 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.366e-7■■□□□ 12.2
SFPQP23246 STAU1-205ENST00000371802 3154 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.436e-7■■□□□ 12.2
SFPQP23246 SYNJ2-201ENST00000355585 7378 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.466e-7■■□□□ 12.2
SFPQP23246 STAU1-201ENST00000340954 3334 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.496e-7■■□□□ 12.2
SFPQP23246 STAU1-207ENST00000371856 3684 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.516e-7■■□□□ 12.2
SFPQP23246 STAU1-206ENST00000371828 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.566e-7■■□□□ 12.2
SFPQP23246 AC016205.1-201ENST00000591629 2306 ntTSL 2 BASIC9.47□□□□□ -0.896e-7■■□□□ 12.2
SFPQP23246 SYNJ2-203ENST00000367113 939 ntTSL 28.82□□□□□ -16e-7■■□□□ 12.2
SFPQP23246 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.156e-7■■□□□ 12.2
SFPQP23246 KANSL1-216ENST00000577114 629 ntTSL 57.53□□□□□ -1.26e-7■■□□□ 12.2
SFPQP23246 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.226e-7■■□□□ 12.2
SFPQP23246 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.256e-7■■□□□ 12.2
SFPQP23246 CDHR3-213ENST00000488386 540 ntTSL 36.55□□□□□ -1.366e-7■■□□□ 12.2
Retrieved 100 of 4,991 protein–RNA pairs in 394.9 ms