RNA–Protein interactions for RNA: ENST00000493835.5

ZEB1-207, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 5

Gene ZEB1, Length 683 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-207ENST00000493835 AEBP2Q6ZN18 517 aaPredicted RBP25.99■■□□□ 1.75
ZEB1-207ENST00000493835 CHIC1Q5VXU3 224 aa24.63■■□□□ 1.53
ZEB1-207ENST00000493835 SENP3Q9H4L4 574 aaPredicted RBP22.14■■□□□ 1.13
ZEB1-207ENST00000493835 PHF23Q9BUL5 403 aaPredicted RBP21.85■■□□□ 1.09
ZEB1-207ENST00000493835 FOXD1Q16676 465 aa20.66■□□□□ 0.9
ZEB1-207ENST00000493835 PLPPR3Q6T4P5 718 aa19.64■□□□□ 0.73
ZEB1-207ENST00000493835 MSH5O43196 834 aa19.32■□□□□ 0.68
ZEB1-207ENST00000493835 PPP6R1Q9UPN7 881 aa19.31■□□□□ 0.68
ZEB1-207ENST00000493835 PIAS4Q8N2W9 510 aaPredicted RBP19.25■□□□□ 0.67
ZEB1-207ENST00000493835 ADRA2BP18089 450 aa19.21■□□□□ 0.67
ZEB1-207ENST00000493835 POTEDQ86YR6 584 aa18.93■□□□□ 0.62
ZEB1-207ENST00000493835 MAPK8IP2Q13387 824 aaPredicted RBP17.66■□□□□ 0.42
ZEB1-207ENST00000493835 DMRT2Q9Y5R5 561 aa17.58■□□□□ 0.4
ZEB1-207ENST00000493835 SCAF1Q9H7N4 1312 aaKnown RBP17.55■□□□□ 0.4
ZEB1-207ENST00000493835 PPP4R3CPQ6ZMV5 832 aa17.21■□□□□ 0.35
ZEB1-207ENST00000493835 HOXD11P31277 338 aaPredicted RBP16.93■□□□□ 0.3
ZEB1-207ENST00000493835 CNKSR2Q8WXI2 1034 aa16.9■□□□□ 0.3
ZEB1-207ENST00000493835 RNF216Q9NWF9 866 aaPredicted RBP16.77■□□□□ 0.28
ZEB1-207ENST00000493835 DCAF8L1A6NGE4 600 aa16.74■□□□□ 0.27
ZEB1-207ENST00000493835 CACNB1Q02641 598 aaPredicted RBP16.56■□□□□ 0.24
ZEB1-207ENST00000493835 NCBP3Q53F19 620 aaKnown RBP16.52■□□□□ 0.24
ZEB1-207ENST00000493835 RNF39Q9H2S5 420 aa16.52■□□□□ 0.24
ZEB1-207ENST00000493835 DNAJC5BQ9UF47 199 aa16.39■□□□□ 0.21
ZEB1-207ENST00000493835 NPM3O75607 178 aaKnown RBP16.32■□□□□ 0.2
ZEB1-207ENST00000493835 C1QBPQ07021 282 aaKnown RBP16.26■□□□□ 0.19
ZEB1-207ENST00000493835 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.05■□□□□ 0.16
ZEB1-207ENST00000493835 KCNA4P22459 653 aa15.96■□□□□ 0.15
ZEB1-207ENST00000493835 U3KPZ7 1027 aaPredicted RBP15.77■□□□□ 0.12
ZEB1-207ENST00000493835 SLC4A2P04920 1241 aa15.62■□□□□ 0.09
ZEB1-207ENST00000493835 SPINK5Q9NQ38 1064 aaPredicted RBP15.53■□□□□ 0.08
ZEB1-207ENST00000493835 CAPN15O75808 1086 aa15.45■□□□□ 0.06
ZEB1-207ENST00000493835 DSG3P32926 999 aa15.45■□□□□ 0.06
ZEB1-207ENST00000493835 EHMT2Q96KQ7 1210 aa15.4■□□□□ 0.06
ZEB1-207ENST00000493835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.27■□□□□ 0.04
ZEB1-207ENST00000493835 HNRNPUL2Q1KMD3 747 aaKnown RBP15.27■□□□□ 0.04
ZEB1-207ENST00000493835 APLP2Q06481 763 aa15.26■□□□□ 0.03
ZEB1-207ENST00000493835 TRHP20396 242 aaPredicted RBP15.2■□□□□ 0.02
ZEB1-207ENST00000493835 ZNF219Q9P2Y4 722 aaPredicted RBP15.2■□□□□ 0.02
ZEB1-207ENST00000493835 SAMD1Q6SPF0 538 aaPredicted RBP15.19■□□□□ 0.02
ZEB1-207ENST00000493835 SLC4A1APQ9BWU0 796 aaKnown RBP15.13■□□□□ 0.01
ZEB1-207ENST00000493835 ABCB7O75027 752 aa15.1■□□□□ 0.01
ZEB1-207ENST00000493835 MYCNP04198 464 aaPredicted RBP15.07■□□□□ 0
ZEB1-207ENST00000493835 CSRNP3Q8WYN3 585 aa14.97□□□□□ -0.01
ZEB1-207ENST00000493835 FOXD4L1Q9NU39 408 aa14.89□□□□□ -0.03
ZEB1-207ENST00000493835 POLA2Q14181 598 aa14.82□□□□□ -0.04
ZEB1-207ENST00000493835 POTEHQ6S545 545 aa14.81□□□□□ -0.04
ZEB1-207ENST00000493835 ATF5Q9Y2D1 282 aaPredicted RBP14.75□□□□□ -0.05
ZEB1-207ENST00000493835 ZBTB22O15209 634 aa14.71□□□□□ -0.05
ZEB1-207ENST00000493835 RBM42Q9BTD8 480 aaKnown RBP14.7□□□□□ -0.06
ZEB1-207ENST00000493835 ZBTB12Q9Y330 459 aaPredicted RBP14.51□□□□□ -0.09
ZEB1-207ENST00000493835 ATXN8OSP0DMR3 200 aa14.48□□□□□ -0.09
ZEB1-207ENST00000493835 CHRDL2Q6WN34 429 aa14.4□□□□□ -0.1
ZEB1-207ENST00000493835 AKT1S1Q96B36 256 aa14.38□□□□□ -0.11
ZEB1-207ENST00000493835 OSCARQ8IYS5 282 aa14.34□□□□□ -0.11
ZEB1-207ENST00000493835 REM2Q8IYK8 340 aaPredicted RBP14.25□□□□□ -0.13
ZEB1-207ENST00000493835 FBLN2P98095 1184 aa14.12□□□□□ -0.15
ZEB1-207ENST00000493835 MKRN4PQ13434 485 aaPredicted RBP14.09□□□□□ -0.15
ZEB1-207ENST00000493835 SPDYE2BA6NHP3 402 aa14.08□□□□□ -0.16
ZEB1-207ENST00000493835 PITPNM1O00562 1244 aa14.08□□□□□ -0.16
ZEB1-207ENST00000493835 SPDYE6P0CI01 402 aa14.08□□□□□ -0.16
ZEB1-207ENST00000493835 SPDYE2Q495Y8 402 aa14.08□□□□□ -0.16
ZEB1-207ENST00000493835 PIP4P2Q8N4L2 257 aa14.07□□□□□ -0.16
ZEB1-207ENST00000493835 FXR2P51116 673 aaKnown RBP eCLIP14□□□□□ -0.17
ZEB1-207ENST00000493835 SSUH2Q9Y2M2 353 aa13.91□□□□□ -0.18
ZEB1-207ENST00000493835 ZNF692Q9BU19 519 aaPredicted RBP13.88□□□□□ -0.19
ZEB1-207ENST00000493835 SP7Q8TDD2 431 aaPredicted RBP13.87□□□□□ -0.19
ZEB1-207ENST00000493835 SPDYE1Q8NFV5 336 aaPredicted RBP13.82□□□□□ -0.2
ZEB1-207ENST00000493835 HAX1O00165 279 aa13.78□□□□□ -0.2
ZEB1-207ENST00000493835 CLEC11AQ9Y240 323 aa13.76□□□□□ -0.21
ZEB1-207ENST00000493835 PRKAR2AP13861 404 aaKnown RBP13.71□□□□□ -0.21
ZEB1-207ENST00000493835 PABPN1Q86U42 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
ZEB1-207ENST00000493835 EVX2Q03828 476 aa13.67□□□□□ -0.22
ZEB1-207ENST00000493835 C19orf67A6NJJ6 358 aa13.55□□□□□ -0.24
ZEB1-207ENST00000493835 PRR29P0C7W0 189 aa13.55□□□□□ -0.24
ZEB1-207ENST00000493835 CHADLQ6NUI6 762 aa13.53□□□□□ -0.24
ZEB1-207ENST00000493835 FKBP8Q14318 412 aa13.47□□□□□ -0.25
ZEB1-207ENST00000493835 FARP1Q9Y4F1 1045 aaPredicted RBP13.36□□□□□ -0.27
ZEB1-207ENST00000493835 SPDYE4A6NLX3 237 aa13.35□□□□□ -0.27
ZEB1-207ENST00000493835 GABBR2O75899 941 aa13.34□□□□□ -0.27
ZEB1-207ENST00000493835 RTN4Q9NQC3 1192 aaKnown RBP13.3□□□□□ -0.28
ZEB1-207ENST00000493835 STAG3Q9UJ98 1225 aa13.3□□□□□ -0.28
ZEB1-207ENST00000493835 CD44P16070 742 aaKnown RBP13.26□□□□□ -0.29
ZEB1-207ENST00000493835 CREBZFQ9NS37 354 aa13.26□□□□□ -0.29
ZEB1-207ENST00000493835 AMER1Q5JTC6 1135 aaPredicted RBP13.22□□□□□ -0.29
ZEB1-207ENST00000493835 CLCN6P51797 869 aa13.14□□□□□ -0.31
ZEB1-207ENST00000493835 PROM2Q8N271 834 aa13.11□□□□□ -0.31
ZEB1-207ENST00000493835 ZNF579Q8NAF0 562 aaKnown RBP13.09□□□□□ -0.31
ZEB1-207ENST00000493835 POTEIP0CG38 1075 aa13.08□□□□□ -0.32
ZEB1-207ENST00000493835 MNX1P50219 401 aaPredicted RBP13.06□□□□□ -0.32
ZEB1-207ENST00000493835 ZRANB1Q9UGI0 708 aa13.06□□□□□ -0.32
ZEB1-207ENST00000493835 LHX8Q68G74 356 aa13□□□□□ -0.33
ZEB1-207ENST00000493835 NPM1P06748 294 aaKnown RBP eCLIP12.96□□□□□ -0.33
ZEB1-207ENST00000493835 GALR2O43603 387 aaPredicted RBP12.92□□□□□ -0.34
ZEB1-207ENST00000493835 DCBLD2Q96PD2 775 aa12.92□□□□□ -0.34
ZEB1-207ENST00000493835 PAK3O75914 559 aaPredicted RBP12.91□□□□□ -0.34
ZEB1-207ENST00000493835 SLC24A1O60721 1099 aa12.89□□□□□ -0.35
ZEB1-207ENST00000493835 PHF12Q96QT6 1004 aa12.89□□□□□ -0.35
ZEB1-207ENST00000493835 FBXO3Q9UK99 471 aa12.74□□□□□ -0.37
ZEB1-207ENST00000493835 CCDC61Q9Y6R9 512 aa12.73□□□□□ -0.37
ZEB1-207ENST00000493835 MIER1Q8N108 512 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms