Protein–RNA interactions for Protein: P18754

RCC1, Regulator of chromosome condensation, humanhuman

Predicted RBP Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1P18754 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCC1P18754 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCC1P18754 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RCC1P18754 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.65■□□□□ 0.58
RCC1P18754 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RCC1P18754 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCC1P18754 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RCC1P18754 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RCC1P18754 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
RCC1P18754 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCC1P18754 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCC1P18754 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCC1P18754 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.64■□□□□ 0.57
RCC1P18754 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.64■□□□□ 0.57
RCC1P18754 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.64■□□□□ 0.57
RCC1P18754 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RCC1P18754 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.64■□□□□ 0.57
RCC1P18754 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.64■□□□□ 0.57
RCC1P18754 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCC1P18754 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RCC1P18754 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCC1P18754 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.64■□□□□ 0.57
RCC1P18754 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCC1P18754 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RCC1P18754 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.63■□□□□ 0.57
RCC1P18754 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RCC1P18754 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.63■□□□□ 0.57
RCC1P18754 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RCC1P18754 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RCC1P18754 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCC1P18754 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCC1P18754 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
RCC1P18754 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RCC1P18754 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCC1P18754 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCC1P18754 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.62■□□□□ 0.57
RCC1P18754 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.62■□□□□ 0.57
RCC1P18754 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.62■□□□□ 0.57
RCC1P18754 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.62■□□□□ 0.57
RCC1P18754 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCC1P18754 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RCC1P18754 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.62■□□□□ 0.57
RCC1P18754 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.62■□□□□ 0.57
RCC1P18754 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCC1P18754 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCC1P18754 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCC1P18754 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RCC1P18754 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCC1P18754 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCC1P18754 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RCC1P18754 AC021242.3-201ENST00000607598 1377 ntBASIC18.61■□□□□ 0.57
RCC1P18754 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RCC1P18754 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCC1P18754 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCC1P18754 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RCC1P18754 ECEL1P1-201ENST00000373592 1742 ntBASIC18.6■□□□□ 0.57
RCC1P18754 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RCC1P18754 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCC1P18754 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.6■□□□□ 0.57
RCC1P18754 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RCC1P18754 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.6■□□□□ 0.57
RCC1P18754 BX664725.1-201ENST00000438252 379 ntBASIC18.6■□□□□ 0.57
RCC1P18754 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RCC1P18754 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.6■□□□□ 0.57
RCC1P18754 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.6■□□□□ 0.57
RCC1P18754 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCC1P18754 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCC1P18754 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCC1P18754 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCC1P18754 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCC1P18754 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RCC1P18754 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.59■□□□□ 0.57
RCC1P18754 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCC1P18754 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCC1P18754 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.59■□□□□ 0.57
RCC1P18754 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCC1P18754 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCC1P18754 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.59■□□□□ 0.57
RCC1P18754 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.59■□□□□ 0.57
RCC1P18754 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.59■□□□□ 0.57
RCC1P18754 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
RCC1P18754 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCC1P18754 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCC1P18754 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RCC1P18754 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RCC1P18754 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.58■□□□□ 0.57
RCC1P18754 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RCC1P18754 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RCC1P18754 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.58■□□□□ 0.57
RCC1P18754 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.58■□□□□ 0.57
RCC1P18754 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
RCC1P18754 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RCC1P18754 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.58■□□□□ 0.57
RCC1P18754 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RCC1P18754 MIR6722-201ENST00000617286 78 ntBASIC18.58■□□□□ 0.56
RCC1P18754 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RCC1P18754 AC144652.1-201ENST00000609974 1624 ntBASIC18.58■□□□□ 0.56
RCC1P18754 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.58■□□□□ 0.56
RCC1P18754 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.57■□□□□ 0.56
RCC1P18754 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms