Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLUP10909 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLUP10909 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLUP10909 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLUP10909 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLUP10909 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLUP10909 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLUP10909 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLUP10909 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLUP10909 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.93■□□□□ 0.78
CLUP10909 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.93■□□□□ 0.78
CLUP10909 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLUP10909 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLUP10909 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.93■□□□□ 0.78
CLUP10909 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLUP10909 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CLUP10909 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLUP10909 AC127496.7-201ENST00000625110 1798 ntBASIC19.93■□□□□ 0.78
CLUP10909 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLUP10909 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLUP10909 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLUP10909 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.92■□□□□ 0.78
CLUP10909 AC103724.3-201ENST00000564481 992 ntBASIC19.92■□□□□ 0.78
CLUP10909 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.92■□□□□ 0.78
CLUP10909 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CLUP10909 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLUP10909 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLUP10909 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CLUP10909 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.92■□□□□ 0.78
CLUP10909 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.92■□□□□ 0.78
CLUP10909 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLUP10909 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLUP10909 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CLUP10909 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
CLUP10909 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.91■□□□□ 0.78
CLUP10909 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLUP10909 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLUP10909 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLUP10909 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLUP10909 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLUP10909 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CLUP10909 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLUP10909 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLUP10909 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.91■□□□□ 0.78
CLUP10909 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.9■□□□□ 0.78
CLUP10909 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLUP10909 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CLUP10909 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLUP10909 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLUP10909 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.9■□□□□ 0.78
CLUP10909 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.9■□□□□ 0.78
CLUP10909 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLUP10909 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CLUP10909 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.9■□□□□ 0.78
CLUP10909 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
CLUP10909 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLUP10909 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.9■□□□□ 0.78
CLUP10909 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLUP10909 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CLUP10909 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.89■□□□□ 0.77
CLUP10909 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.89■□□□□ 0.77
CLUP10909 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLUP10909 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLUP10909 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLUP10909 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLUP10909 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CLUP10909 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLUP10909 AC144652.1-201ENST00000609974 1624 ntBASIC19.88■□□□□ 0.77
CLUP10909 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CLUP10909 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.88■□□□□ 0.77
CLUP10909 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CLUP10909 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.88■□□□□ 0.77
CLUP10909 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.88■□□□□ 0.77
CLUP10909 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.88■□□□□ 0.77
CLUP10909 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CLUP10909 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CLUP10909 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLUP10909 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLUP10909 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLUP10909 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLUP10909 AC080038.3-201ENST00000623346 1952 ntBASIC19.88■□□□□ 0.77
CLUP10909 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CLUP10909 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLUP10909 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLUP10909 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
CLUP10909 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.87■□□□□ 0.77
CLUP10909 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLUP10909 AC139530.1-201ENST00000575312 1977 ntBASIC19.87■□□□□ 0.77
CLUP10909 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLUP10909 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLUP10909 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.87■□□□□ 0.77
CLUP10909 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CLUP10909 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.87■□□□□ 0.77
CLUP10909 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CLUP10909 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLUP10909 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.87■□□□□ 0.77
CLUP10909 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLUP10909 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CLUP10909 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLUP10909 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms