Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCNYL3P0C7X3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.27■■□□□ 1
CCNYL3P0C7X3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCNYL3P0C7X3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.27■■□□□ 1
CCNYL3P0C7X3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.27■■□□□ 1
CCNYL3P0C7X3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.27■■□□□ 1
CCNYL3P0C7X3 AC126544.1-201ENST00000580842 1059 ntBASIC21.27■■□□□ 1
CCNYL3P0C7X3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCNYL3P0C7X3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CCNYL3P0C7X3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
CCNYL3P0C7X3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCNYL3P0C7X3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCNYL3P0C7X3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCNYL3P0C7X3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.26■□□□□ 0.99
CCNYL3P0C7X3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCNYL3P0C7X3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCNYL3P0C7X3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.26■□□□□ 0.99
CCNYL3P0C7X3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.26■□□□□ 0.99
CCNYL3P0C7X3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCNYL3P0C7X3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCNYL3P0C7X3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCNYL3P0C7X3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCNYL3P0C7X3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCNYL3P0C7X3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNYL3P0C7X3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.25■□□□□ 0.99
CCNYL3P0C7X3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.25■□□□□ 0.99
CCNYL3P0C7X3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNYL3P0C7X3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNYL3P0C7X3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNYL3P0C7X3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNYL3P0C7X3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCNYL3P0C7X3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCNYL3P0C7X3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.24■□□□□ 0.99
CCNYL3P0C7X3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCNYL3P0C7X3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CCNYL3P0C7X3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.24■□□□□ 0.99
CCNYL3P0C7X3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CCNYL3P0C7X3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CCNYL3P0C7X3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCNYL3P0C7X3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNYL3P0C7X3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.23■□□□□ 0.99
CCNYL3P0C7X3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNYL3P0C7X3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.23■□□□□ 0.99
CCNYL3P0C7X3 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.23■□□□□ 0.99
CCNYL3P0C7X3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.23■□□□□ 0.99
CCNYL3P0C7X3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.23■□□□□ 0.99
CCNYL3P0C7X3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNYL3P0C7X3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNYL3P0C7X3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCNYL3P0C7X3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCNYL3P0C7X3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.22■□□□□ 0.99
CCNYL3P0C7X3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.22■□□□□ 0.99
CCNYL3P0C7X3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.22■□□□□ 0.99
CCNYL3P0C7X3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNYL3P0C7X3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.22■□□□□ 0.99
CCNYL3P0C7X3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNYL3P0C7X3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNYL3P0C7X3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.22■□□□□ 0.99
CCNYL3P0C7X3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCNYL3P0C7X3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNYL3P0C7X3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.21■□□□□ 0.99
CCNYL3P0C7X3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.21■□□□□ 0.99
CCNYL3P0C7X3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.21■□□□□ 0.99
CCNYL3P0C7X3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNYL3P0C7X3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CCNYL3P0C7X3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNYL3P0C7X3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNYL3P0C7X3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.21■□□□□ 0.99
CCNYL3P0C7X3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNYL3P0C7X3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNYL3P0C7X3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNYL3P0C7X3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNYL3P0C7X3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNYL3P0C7X3 DUSP8P5-201ENST00000422884 1815 ntBASIC21.2■□□□□ 0.98
CCNYL3P0C7X3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNYL3P0C7X3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNYL3P0C7X3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNYL3P0C7X3 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.2■□□□□ 0.98
CCNYL3P0C7X3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNYL3P0C7X3 AC087623.3-201ENST00000607047 1098 ntBASIC21.2■□□□□ 0.98
CCNYL3P0C7X3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNYL3P0C7X3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.2■□□□□ 0.98
CCNYL3P0C7X3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCNYL3P0C7X3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCNYL3P0C7X3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNYL3P0C7X3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.2■□□□□ 0.98
CCNYL3P0C7X3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCNYL3P0C7X3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNYL3P0C7X3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.19■□□□□ 0.98
CCNYL3P0C7X3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.19■□□□□ 0.98
CCNYL3P0C7X3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCNYL3P0C7X3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCNYL3P0C7X3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.19■□□□□ 0.98
CCNYL3P0C7X3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.19■□□□□ 0.98
CCNYL3P0C7X3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.19■□□□□ 0.98
CCNYL3P0C7X3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
CCNYL3P0C7X3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CCNYL3P0C7X3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCNYL3P0C7X3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.19■□□□□ 0.98
CCNYL3P0C7X3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms