Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 LINC00526-201ENST00000581067 1875 ntBASIC20.4■□□□□ 0.86
THBS1P07996 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
THBS1P07996 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.39■□□□□ 0.86
THBS1P07996 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
THBS1P07996 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.39■□□□□ 0.86
THBS1P07996 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.39■□□□□ 0.85
THBS1P07996 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
THBS1P07996 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.39■□□□□ 0.85
THBS1P07996 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
THBS1P07996 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
THBS1P07996 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.38■□□□□ 0.85
THBS1P07996 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.38■□□□□ 0.85
THBS1P07996 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.38■□□□□ 0.85
THBS1P07996 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
THBS1P07996 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
THBS1P07996 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
THBS1P07996 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.38■□□□□ 0.85
THBS1P07996 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.38■□□□□ 0.85
THBS1P07996 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
THBS1P07996 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
THBS1P07996 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
THBS1P07996 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
THBS1P07996 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
THBS1P07996 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
THBS1P07996 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
THBS1P07996 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
THBS1P07996 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
THBS1P07996 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
THBS1P07996 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
THBS1P07996 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.37■□□□□ 0.85
THBS1P07996 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.37■□□□□ 0.85
THBS1P07996 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
THBS1P07996 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
THBS1P07996 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
THBS1P07996 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
THBS1P07996 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.37■□□□□ 0.85
THBS1P07996 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
THBS1P07996 EP400NL-214ENST00000641289 2402 ntBASIC20.36■□□□□ 0.85
THBS1P07996 AC087742.1-201ENST00000575880 1738 ntBASIC20.36■□□□□ 0.85
THBS1P07996 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.36■□□□□ 0.85
THBS1P07996 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
THBS1P07996 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.36■□□□□ 0.85
THBS1P07996 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
THBS1P07996 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
THBS1P07996 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
THBS1P07996 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
THBS1P07996 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
THBS1P07996 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
THBS1P07996 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.36■□□□□ 0.85
THBS1P07996 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.36■□□□□ 0.85
THBS1P07996 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
THBS1P07996 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
THBS1P07996 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
THBS1P07996 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
THBS1P07996 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.35■□□□□ 0.85
THBS1P07996 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
THBS1P07996 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.35■□□□□ 0.85
THBS1P07996 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
THBS1P07996 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.35■□□□□ 0.85
THBS1P07996 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.35■□□□□ 0.85
THBS1P07996 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
THBS1P07996 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.35■□□□□ 0.85
THBS1P07996 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
THBS1P07996 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
THBS1P07996 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
THBS1P07996 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
THBS1P07996 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
THBS1P07996 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
THBS1P07996 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.34■□□□□ 0.85
THBS1P07996 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
THBS1P07996 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
THBS1P07996 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
THBS1P07996 KRT16P3-201ENST00000439127 1283 ntBASIC20.34■□□□□ 0.85
THBS1P07996 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
THBS1P07996 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
THBS1P07996 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
THBS1P07996 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.34■□□□□ 0.85
THBS1P07996 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
THBS1P07996 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
THBS1P07996 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
THBS1P07996 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
THBS1P07996 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
THBS1P07996 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
THBS1P07996 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
THBS1P07996 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.33■□□□□ 0.85
THBS1P07996 AL117332.1-201ENST00000622628 974 ntBASIC20.33■□□□□ 0.85
THBS1P07996 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
THBS1P07996 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
THBS1P07996 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
THBS1P07996 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
THBS1P07996 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
THBS1P07996 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
THBS1P07996 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
THBS1P07996 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
THBS1P07996 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
THBS1P07996 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.32■□□□□ 0.84
THBS1P07996 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.32■□□□□ 0.84
THBS1P07996 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.32■□□□□ 0.84
THBS1P07996 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.32■□□□□ 0.84
THBS1P07996 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms