Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
GAPDHP04406 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GAPDHP04406 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.46■□□□□ 0.55
GAPDHP04406 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
GAPDHP04406 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.46■□□□□ 0.54
GAPDHP04406 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GAPDHP04406 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.45■□□□□ 0.54
GAPDHP04406 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.45■□□□□ 0.54
GAPDHP04406 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GAPDHP04406 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GAPDHP04406 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.45■□□□□ 0.54
GAPDHP04406 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.45■□□□□ 0.54
GAPDHP04406 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.45■□□□□ 0.54
GAPDHP04406 AL035685.1-201ENST00000636663 812 ntBASIC18.45■□□□□ 0.54
GAPDHP04406 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GAPDHP04406 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GAPDHP04406 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GAPDHP04406 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GAPDHP04406 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GAPDHP04406 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GAPDHP04406 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
GAPDHP04406 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GAPDHP04406 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
GAPDHP04406 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.44■□□□□ 0.54
GAPDHP04406 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.44■□□□□ 0.54
GAPDHP04406 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GAPDHP04406 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GAPDHP04406 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GAPDHP04406 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.44■□□□□ 0.54
GAPDHP04406 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.44■□□□□ 0.54
GAPDHP04406 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GAPDHP04406 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
GAPDHP04406 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GAPDHP04406 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
GAPDHP04406 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.44■□□□□ 0.54
GAPDHP04406 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GAPDHP04406 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GAPDHP04406 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GAPDHP04406 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GAPDHP04406 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
GAPDHP04406 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GAPDHP04406 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
GAPDHP04406 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GAPDHP04406 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GAPDHP04406 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.43■□□□□ 0.54
GAPDHP04406 MTDHP2-201ENST00000601468 714 ntBASIC18.43■□□□□ 0.54
GAPDHP04406 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.43■□□□□ 0.54
GAPDHP04406 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
GAPDHP04406 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
GAPDHP04406 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
GAPDHP04406 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GAPDHP04406 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
GAPDHP04406 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.43■□□□□ 0.54
GAPDHP04406 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.43■□□□□ 0.54
GAPDHP04406 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GAPDHP04406 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GAPDHP04406 ESRRAP2-201ENST00000418437 1549 ntBASIC18.43■□□□□ 0.54
GAPDHP04406 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.42■□□□□ 0.54
GAPDHP04406 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GAPDHP04406 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.42■□□□□ 0.54
GAPDHP04406 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
GAPDHP04406 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
GAPDHP04406 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
GAPDHP04406 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
GAPDHP04406 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.42■□□□□ 0.54
GAPDHP04406 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GAPDHP04406 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
GAPDHP04406 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GAPDHP04406 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
GAPDHP04406 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
GAPDHP04406 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
GAPDHP04406 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
GAPDHP04406 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.42■□□□□ 0.54
GAPDHP04406 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
GAPDHP04406 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.42■□□□□ 0.54
GAPDHP04406 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
GAPDHP04406 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
GAPDHP04406 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.41■□□□□ 0.54
GAPDHP04406 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
GAPDHP04406 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GAPDHP04406 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GAPDHP04406 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GAPDHP04406 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
GAPDHP04406 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.41■□□□□ 0.54
GAPDHP04406 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.41■□□□□ 0.54
GAPDHP04406 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.41■□□□□ 0.54
GAPDHP04406 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
GAPDHP04406 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GAPDHP04406 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
GAPDHP04406 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
GAPDHP04406 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GAPDHP04406 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
GAPDHP04406 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
GAPDHP04406 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GAPDHP04406 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GAPDHP04406 TSPY9P-201ENST00000440215 945 ntBASIC18.4■□□□□ 0.54
GAPDHP04406 TSPY11P-201ENST00000442607 1045 ntBASIC18.4■□□□□ 0.54
GAPDHP04406 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.4■□□□□ 0.54
GAPDHP04406 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.4■□□□□ 0.54
GAPDHP04406 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms