Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 LONRF2P2-201ENST00000439212 571 ntBASIC18.63■□□□□ 0.57
CD74P04233 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD74P04233 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CD74P04233 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.63■□□□□ 0.57
CD74P04233 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.63■□□□□ 0.57
CD74P04233 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.63■□□□□ 0.57
CD74P04233 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
CD74P04233 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.62■□□□□ 0.57
CD74P04233 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CD74P04233 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD74P04233 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD74P04233 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
CD74P04233 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CD74P04233 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.62■□□□□ 0.57
CD74P04233 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.62■□□□□ 0.57
CD74P04233 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CD74P04233 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD74P04233 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CD74P04233 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CD74P04233 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD74P04233 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD74P04233 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD74P04233 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.62■□□□□ 0.57
CD74P04233 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CD74P04233 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CD74P04233 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CD74P04233 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD74P04233 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD74P04233 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.61■□□□□ 0.57
CD74P04233 MIR7108-201ENST00000614319 87 ntBASIC18.61■□□□□ 0.57
CD74P04233 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
CD74P04233 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD74P04233 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD74P04233 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
CD74P04233 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CD74P04233 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.6■□□□□ 0.57
CD74P04233 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CD74P04233 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CD74P04233 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD74P04233 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
CD74P04233 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD74P04233 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.6■□□□□ 0.57
CD74P04233 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD74P04233 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.6■□□□□ 0.57
CD74P04233 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CD74P04233 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CD74P04233 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CD74P04233 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.59■□□□□ 0.57
CD74P04233 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CD74P04233 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.59■□□□□ 0.57
CD74P04233 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD74P04233 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD74P04233 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD74P04233 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CD74P04233 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.59■□□□□ 0.57
CD74P04233 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.59■□□□□ 0.57
CD74P04233 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD74P04233 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CD74P04233 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.58■□□□□ 0.57
CD74P04233 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
CD74P04233 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD74P04233 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD74P04233 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD74P04233 AC005229.4-201ENST00000610085 2198 ntBASIC18.58■□□□□ 0.56
CD74P04233 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD74P04233 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.57■□□□□ 0.56
CD74P04233 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD74P04233 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD74P04233 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD74P04233 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD74P04233 MIR6765-201ENST00000614092 87 ntBASIC18.57■□□□□ 0.56
CD74P04233 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.57■□□□□ 0.56
CD74P04233 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.57■□□□□ 0.56
CD74P04233 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.57■□□□□ 0.56
CD74P04233 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CD74P04233 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD74P04233 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD74P04233 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.56■□□□□ 0.56
CD74P04233 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD74P04233 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CD74P04233 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD74P04233 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD74P04233 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.56■□□□□ 0.56
CD74P04233 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD74P04233 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD74P04233 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.56■□□□□ 0.56
CD74P04233 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CD74P04233 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CD74P04233 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD74P04233 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CD74P04233 AC073130.3-201ENST00000624389 2278 ntBASIC18.56■□□□□ 0.56
CD74P04233 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CD74P04233 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CD74P04233 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CD74P04233 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD74P04233 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD74P04233 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD74P04233 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD74P04233 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.55■□□□□ 0.56
CD74P04233 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms