Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.95■□□□□ 0.78
RAF1P04049 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAF1P04049 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAF1P04049 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAF1P04049 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RAF1P04049 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAF1P04049 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RAF1P04049 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAF1P04049 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.94■□□□□ 0.78
RAF1P04049 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RAF1P04049 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAF1P04049 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAF1P04049 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAF1P04049 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAF1P04049 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAF1P04049 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAF1P04049 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAF1P04049 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.93■□□□□ 0.78
RAF1P04049 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAF1P04049 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAF1P04049 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.93■□□□□ 0.78
RAF1P04049 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RAF1P04049 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
RAF1P04049 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.93■□□□□ 0.78
RAF1P04049 AC105265.2-201ENST00000467189 838 ntBASIC19.93■□□□□ 0.78
RAF1P04049 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.93■□□□□ 0.78
RAF1P04049 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAF1P04049 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.93■□□□□ 0.78
RAF1P04049 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAF1P04049 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RAF1P04049 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RAF1P04049 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.92■□□□□ 0.78
RAF1P04049 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.92■□□□□ 0.78
RAF1P04049 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAF1P04049 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAF1P04049 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAF1P04049 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAF1P04049 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.92■□□□□ 0.78
RAF1P04049 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.92■□□□□ 0.78
RAF1P04049 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAF1P04049 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAF1P04049 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RAF1P04049 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.91■□□□□ 0.78
RAF1P04049 SLC25A24-204ENST00000569674 2357 ntBASIC19.91■□□□□ 0.78
RAF1P04049 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.91■□□□□ 0.78
RAF1P04049 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RAF1P04049 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAF1P04049 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAF1P04049 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAF1P04049 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAF1P04049 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.91■□□□□ 0.78
RAF1P04049 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAF1P04049 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
RAF1P04049 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAF1P04049 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAF1P04049 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.91■□□□□ 0.78
RAF1P04049 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RAF1P04049 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
RAF1P04049 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAF1P04049 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAF1P04049 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAF1P04049 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RAF1P04049 EP400NL-214ENST00000641289 2402 ntBASIC19.9■□□□□ 0.78
RAF1P04049 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAF1P04049 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.9■□□□□ 0.78
RAF1P04049 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAF1P04049 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.9■□□□□ 0.78
RAF1P04049 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAF1P04049 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
RAF1P04049 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RAF1P04049 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.9■□□□□ 0.78
RAF1P04049 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAF1P04049 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAF1P04049 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAF1P04049 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAF1P04049 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.89■□□□□ 0.77
RAF1P04049 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAF1P04049 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.89■□□□□ 0.77
RAF1P04049 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.89■□□□□ 0.77
RAF1P04049 DUX4L19-201ENST00000557448 1267 ntBASIC19.89■□□□□ 0.77
RAF1P04049 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RAF1P04049 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.89■□□□□ 0.77
RAF1P04049 C1orf229-201ENST00000623686 2258 ntBASIC19.89■□□□□ 0.77
RAF1P04049 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAF1P04049 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAF1P04049 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RAF1P04049 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.88■□□□□ 0.77
RAF1P04049 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAF1P04049 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAF1P04049 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RAF1P04049 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RAF1P04049 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAF1P04049 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.88■□□□□ 0.77
RAF1P04049 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RAF1P04049 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAF1P04049 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAF1P04049 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAF1P04049 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAF1P04049 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RAF1P04049 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms