Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRGV3P03979 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.38■□□□□ 0.37
TRGV3P03979 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.38■□□□□ 0.37
TRGV3P03979 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRGV3P03979 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRGV3P03979 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV3P03979 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRGV3P03979 SYT6-210ENST00000641643 1587 ntBASIC17.37■□□□□ 0.37
TRGV3P03979 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRGV3P03979 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRGV3P03979 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TRGV3P03979 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
TRGV3P03979 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.37■□□□□ 0.37
TRGV3P03979 AC006455.2-201ENST00000429931 906 ntBASIC17.37■□□□□ 0.37
TRGV3P03979 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TRGV3P03979 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRGV3P03979 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRGV3P03979 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRGV3P03979 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRGV3P03979 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TRGV3P03979 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRGV3P03979 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRGV3P03979 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRGV3P03979 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRGV3P03979 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRGV3P03979 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.36■□□□□ 0.37
TRGV3P03979 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRGV3P03979 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRGV3P03979 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRGV3P03979 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.36■□□□□ 0.37
TRGV3P03979 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TRGV3P03979 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.36■□□□□ 0.37
TRGV3P03979 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRGV3P03979 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.36■□□□□ 0.37
TRGV3P03979 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRGV3P03979 DUSP8P3-201ENST00000399571 1760 ntBASIC17.35■□□□□ 0.37
TRGV3P03979 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.35■□□□□ 0.37
TRGV3P03979 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRGV3P03979 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRGV3P03979 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRGV3P03979 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.35■□□□□ 0.37
TRGV3P03979 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRGV3P03979 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.35■□□□□ 0.37
TRGV3P03979 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.35■□□□□ 0.37
TRGV3P03979 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRGV3P03979 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.35■□□□□ 0.37
TRGV3P03979 pRNA.6-201ENST00000610482 90 ntBASIC17.35■□□□□ 0.37
TRGV3P03979 pRNA.5-201ENST00000612139 90 ntBASIC17.35■□□□□ 0.37
TRGV3P03979 pRNA.11-201ENST00000618423 90 ntBASIC17.35■□□□□ 0.37
TRGV3P03979 pRNA.13-201ENST00000619112 90 ntBASIC17.35■□□□□ 0.37
TRGV3P03979 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRGV3P03979 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRGV3P03979 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.35■□□□□ 0.37
TRGV3P03979 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRGV3P03979 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
TRGV3P03979 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRGV3P03979 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRGV3P03979 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.35■□□□□ 0.37
TRGV3P03979 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRGV3P03979 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRGV3P03979 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRGV3P03979 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRGV3P03979 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRGV3P03979 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRGV3P03979 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRGV3P03979 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRGV3P03979 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRGV3P03979 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.34■□□□□ 0.37
TRGV3P03979 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRGV3P03979 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.34■□□□□ 0.37
TRGV3P03979 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.34■□□□□ 0.37
TRGV3P03979 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRGV3P03979 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRGV3P03979 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.34■□□□□ 0.37
TRGV3P03979 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.34■□□□□ 0.37
TRGV3P03979 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRGV3P03979 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRGV3P03979 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.34■□□□□ 0.37
TRGV3P03979 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.33■□□□□ 0.37
TRGV3P03979 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRGV3P03979 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.33■□□□□ 0.37
TRGV3P03979 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.33■□□□□ 0.37
TRGV3P03979 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
TRGV3P03979 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRGV3P03979 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV3P03979 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV3P03979 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.33■□□□□ 0.36
TRGV3P03979 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV3P03979 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.33■□□□□ 0.36
TRGV3P03979 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV3P03979 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV3P03979 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV3P03979 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV3P03979 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRGV3P03979 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.33■□□□□ 0.36
TRGV3P03979 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV3P03979 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV3P03979 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV3P03979 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRGV3P03979 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms