Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.65■■□□□ 1.54
CD4P01730 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.65■■□□□ 1.54
CD4P01730 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.65■■□□□ 1.54
CD4P01730 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CD4P01730 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
CD4P01730 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.65■■□□□ 1.54
CD4P01730 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
CD4P01730 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CD4P01730 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CD4P01730 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CD4P01730 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
CD4P01730 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.64■■□□□ 1.54
CD4P01730 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.64■■□□□ 1.54
CD4P01730 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC24.64■■□□□ 1.54
CD4P01730 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC24.64■■□□□ 1.54
CD4P01730 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.64■■□□□ 1.53
CD4P01730 AC135731.1-201ENST00000569415 2548 ntBASIC24.64■■□□□ 1.53
CD4P01730 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.64■■□□□ 1.53
CD4P01730 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
CD4P01730 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.64■■□□□ 1.53
CD4P01730 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CD4P01730 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.63■■□□□ 1.53
CD4P01730 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CD4P01730 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CD4P01730 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CD4P01730 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CD4P01730 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.63■■□□□ 1.53
CD4P01730 CDCA4P2-201ENST00000441182 718 ntBASIC24.63■■□□□ 1.53
CD4P01730 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.63■■□□□ 1.53
CD4P01730 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CD4P01730 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CD4P01730 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CD4P01730 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CD4P01730 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CD4P01730 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CD4P01730 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
CD4P01730 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.62■■□□□ 1.53
CD4P01730 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CD4P01730 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.62■■□□□ 1.53
CD4P01730 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
CD4P01730 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CD4P01730 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CD4P01730 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CD4P01730 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.61■■□□□ 1.53
CD4P01730 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.61■■□□□ 1.53
CD4P01730 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.61■■□□□ 1.53
CD4P01730 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.61■■□□□ 1.53
CD4P01730 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
CD4P01730 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CD4P01730 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.6■■□□□ 1.53
CD4P01730 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CD4P01730 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.6■■□□□ 1.53
CD4P01730 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.6■■□□□ 1.53
CD4P01730 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.6■■□□□ 1.53
CD4P01730 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
CD4P01730 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.6■■□□□ 1.53
CD4P01730 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.6■■□□□ 1.53
CD4P01730 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.6■■□□□ 1.53
CD4P01730 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.6■■□□□ 1.53
CD4P01730 AC073111.5-205ENST00000641717 521 ntBASIC24.6■■□□□ 1.53
CD4P01730 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CD4P01730 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CD4P01730 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CD4P01730 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CD4P01730 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CD4P01730 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CD4P01730 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CD4P01730 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CD4P01730 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CD4P01730 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CD4P01730 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CD4P01730 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CD4P01730 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.59■■□□□ 1.53
CD4P01730 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.59■■□□□ 1.53
CD4P01730 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.59■■□□□ 1.53
CD4P01730 TPRG1LP1-201ENST00000598702 760 ntBASIC24.59■■□□□ 1.53
CD4P01730 GXYLT1P5-201ENST00000614548 1189 ntBASIC24.59■■□□□ 1.53
CD4P01730 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
CD4P01730 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.59■■□□□ 1.53
CD4P01730 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CD4P01730 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CD4P01730 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CD4P01730 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
CD4P01730 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
CD4P01730 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CD4P01730 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
CD4P01730 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
CD4P01730 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CD4P01730 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.58■■□□□ 1.53
CD4P01730 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.58■■□□□ 1.53
CD4P01730 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.58■■□□□ 1.53
CD4P01730 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.58■■□□□ 1.52
CD4P01730 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.57■■□□□ 1.52
CD4P01730 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
CD4P01730 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CD4P01730 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CD4P01730 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.57■■□□□ 1.52
CD4P01730 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.57■■□□□ 1.52
CD4P01730 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.57■■□□□ 1.52
CD4P01730 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms