Protein–RNA interactions for Protein: P01137

TGFB1, Transforming growth factor beta-1, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1P01137 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.21■□□□□ 0.99
TGFB1P01137 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.21■□□□□ 0.99
TGFB1P01137 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TGFB1P01137 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.21■□□□□ 0.99
TGFB1P01137 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TGFB1P01137 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TGFB1P01137 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.21■□□□□ 0.99
TGFB1P01137 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TGFB1P01137 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TGFB1P01137 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TGFB1P01137 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TGFB1P01137 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.2■□□□□ 0.98
TGFB1P01137 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
TGFB1P01137 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.2■□□□□ 0.98
TGFB1P01137 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.2■□□□□ 0.98
TGFB1P01137 AL512631.2-201ENST00000604634 923 ntBASIC21.2■□□□□ 0.98
TGFB1P01137 AC009086.3-201ENST00000623486 1008 ntBASIC21.2■□□□□ 0.98
TGFB1P01137 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.2■□□□□ 0.98
TGFB1P01137 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.2■□□□□ 0.98
TGFB1P01137 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
TGFB1P01137 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TGFB1P01137 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TGFB1P01137 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.19■□□□□ 0.98
TGFB1P01137 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.19■□□□□ 0.98
TGFB1P01137 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TGFB1P01137 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TGFB1P01137 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TGFB1P01137 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.19■□□□□ 0.98
TGFB1P01137 AC099791.2-201ENST00000605725 427 ntBASIC21.19■□□□□ 0.98
TGFB1P01137 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TGFB1P01137 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.19■□□□□ 0.98
TGFB1P01137 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TGFB1P01137 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TGFB1P01137 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TGFB1P01137 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TGFB1P01137 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.18■□□□□ 0.98
TGFB1P01137 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TGFB1P01137 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
TGFB1P01137 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
TGFB1P01137 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
TGFB1P01137 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TGFB1P01137 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TGFB1P01137 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TGFB1P01137 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TGFB1P01137 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.18■□□□□ 0.98
TGFB1P01137 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.18■□□□□ 0.98
TGFB1P01137 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TGFB1P01137 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.18■□□□□ 0.98
TGFB1P01137 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TGFB1P01137 AC241377.3-202ENST00000626088 1088 ntBASIC21.18■□□□□ 0.98
TGFB1P01137 AC241585.3-202ENST00000628937 1088 ntBASIC21.18■□□□□ 0.98
TGFB1P01137 AC245100.8-202ENST00000629247 1058 ntBASIC21.18■□□□□ 0.98
TGFB1P01137 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TGFB1P01137 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.18■□□□□ 0.98
TGFB1P01137 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.18■□□□□ 0.98
TGFB1P01137 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.18■□□□□ 0.98
TGFB1P01137 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TGFB1P01137 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.18■□□□□ 0.98
TGFB1P01137 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.18■□□□□ 0.98
TGFB1P01137 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TGFB1P01137 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TGFB1P01137 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TGFB1P01137 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TGFB1P01137 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.17■□□□□ 0.98
TGFB1P01137 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TGFB1P01137 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TGFB1P01137 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.17■□□□□ 0.98
TGFB1P01137 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TGFB1P01137 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TGFB1P01137 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.17■□□□□ 0.98
TGFB1P01137 AC004687.1-201ENST00000579003 1625 ntBASIC21.17■□□□□ 0.98
TGFB1P01137 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.17■□□□□ 0.98
TGFB1P01137 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TGFB1P01137 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TGFB1P01137 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TGFB1P01137 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TGFB1P01137 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TGFB1P01137 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.16■□□□□ 0.98
TGFB1P01137 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TGFB1P01137 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TGFB1P01137 AC006455.2-201ENST00000429931 906 ntBASIC21.16■□□□□ 0.98
TGFB1P01137 SRD5A1P1-201ENST00000442297 786 ntBASIC21.16■□□□□ 0.98
TGFB1P01137 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TGFB1P01137 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TGFB1P01137 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.16■□□□□ 0.98
TGFB1P01137 MIR4466-201ENST00000606121 54 ntBASIC21.16■□□□□ 0.98
TGFB1P01137 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.16■□□□□ 0.98
TGFB1P01137 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TGFB1P01137 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TGFB1P01137 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TGFB1P01137 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TGFB1P01137 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TGFB1P01137 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TGFB1P01137 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TGFB1P01137 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TGFB1P01137 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.15■□□□□ 0.98
TGFB1P01137 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TGFB1P01137 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TGFB1P01137 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TGFB1P01137 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms