Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.47■□□□□ 0.71
ALX3O95076 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.47■□□□□ 0.71
ALX3O95076 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ALX3O95076 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
ALX3O95076 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
ALX3O95076 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.47■□□□□ 0.71
ALX3O95076 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.47■□□□□ 0.71
ALX3O95076 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ALX3O95076 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ALX3O95076 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ALX3O95076 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
ALX3O95076 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALX3O95076 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
ALX3O95076 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALX3O95076 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ALX3O95076 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALX3O95076 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALX3O95076 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.46■□□□□ 0.71
ALX3O95076 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.46■□□□□ 0.71
ALX3O95076 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.46■□□□□ 0.71
ALX3O95076 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.46■□□□□ 0.71
ALX3O95076 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ALX3O95076 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALX3O95076 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALX3O95076 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALX3O95076 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ALX3O95076 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALX3O95076 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ALX3O95076 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALX3O95076 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALX3O95076 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
ALX3O95076 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALX3O95076 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ALX3O95076 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ALX3O95076 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALX3O95076 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALX3O95076 GUSBP5-202ENST00000510805 1989 ntBASIC19.45■□□□□ 0.7
ALX3O95076 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.45■□□□□ 0.7
ALX3O95076 DUX4L18-201ENST00000553347 1267 ntBASIC19.45■□□□□ 0.7
ALX3O95076 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ALX3O95076 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
ALX3O95076 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALX3O95076 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.45■□□□□ 0.7
ALX3O95076 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALX3O95076 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ALX3O95076 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALX3O95076 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ALX3O95076 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALX3O95076 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALX3O95076 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
ALX3O95076 AF131216.4-201ENST00000638924 1588 ntBASIC19.44■□□□□ 0.7
ALX3O95076 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALX3O95076 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALX3O95076 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.44■□□□□ 0.7
ALX3O95076 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ALX3O95076 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.44■□□□□ 0.7
ALX3O95076 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ALX3O95076 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALX3O95076 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.44■□□□□ 0.7
ALX3O95076 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.44■□□□□ 0.7
ALX3O95076 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ALX3O95076 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALX3O95076 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.44■□□□□ 0.7
ALX3O95076 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.43■□□□□ 0.7
ALX3O95076 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.43■□□□□ 0.7
ALX3O95076 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.43■□□□□ 0.7
ALX3O95076 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALX3O95076 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ALX3O95076 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ALX3O95076 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALX3O95076 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ALX3O95076 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ALX3O95076 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALX3O95076 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALX3O95076 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.42■□□□□ 0.7
ALX3O95076 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.42■□□□□ 0.7
ALX3O95076 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ALX3O95076 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ALX3O95076 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALX3O95076 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.42■□□□□ 0.7
ALX3O95076 AC004448.1-201ENST00000458332 883 ntBASIC19.42■□□□□ 0.7
ALX3O95076 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.42■□□□□ 0.7
ALX3O95076 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ALX3O95076 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ALX3O95076 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
ALX3O95076 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.42■□□□□ 0.7
ALX3O95076 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALX3O95076 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.41■□□□□ 0.7
ALX3O95076 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ALX3O95076 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALX3O95076 ATP5G2P3-201ENST00000429083 425 ntBASIC19.41■□□□□ 0.7
ALX3O95076 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ALX3O95076 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALX3O95076 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.41■□□□□ 0.7
ALX3O95076 MIR4281-201ENST00000580852 62 ntBASIC19.41■□□□□ 0.7
ALX3O95076 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ALX3O95076 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
ALX3O95076 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALX3O95076 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALX3O95076 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms