Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TSPAN9O75954 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN9O75954 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TSPAN9O75954 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN9O75954 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN9O75954 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN9O75954 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN9O75954 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.86■□□□□ 0.61
TSPAN9O75954 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.86■□□□□ 0.61
TSPAN9O75954 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TSPAN9O75954 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.86■□□□□ 0.61
TSPAN9O75954 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN9O75954 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TSPAN9O75954 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TSPAN9O75954 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TSPAN9O75954 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TSPAN9O75954 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TSPAN9O75954 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TSPAN9O75954 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TSPAN9O75954 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TSPAN9O75954 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TSPAN9O75954 AC120024.1-201ENST00000562672 995 ntBASIC18.85■□□□□ 0.61
TSPAN9O75954 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
TSPAN9O75954 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.85■□□□□ 0.61
TSPAN9O75954 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TSPAN9O75954 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
TSPAN9O75954 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.85■□□□□ 0.61
TSPAN9O75954 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TSPAN9O75954 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TSPAN9O75954 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TSPAN9O75954 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.84■□□□□ 0.61
TSPAN9O75954 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.84■□□□□ 0.61
TSPAN9O75954 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TSPAN9O75954 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TSPAN9O75954 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TSPAN9O75954 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.84■□□□□ 0.61
TSPAN9O75954 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.84■□□□□ 0.61
TSPAN9O75954 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.84■□□□□ 0.61
TSPAN9O75954 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TSPAN9O75954 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.83■□□□□ 0.61
TSPAN9O75954 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.83■□□□□ 0.61
TSPAN9O75954 AP003733.4-201ENST00000623785 1697 ntBASIC18.83■□□□□ 0.61
TSPAN9O75954 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TSPAN9O75954 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TSPAN9O75954 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TSPAN9O75954 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.83■□□□□ 0.6
TSPAN9O75954 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.83■□□□□ 0.6
TSPAN9O75954 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TSPAN9O75954 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
TSPAN9O75954 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TSPAN9O75954 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TSPAN9O75954 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.83■□□□□ 0.6
TSPAN9O75954 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TSPAN9O75954 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TSPAN9O75954 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TSPAN9O75954 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.83■□□□□ 0.6
TSPAN9O75954 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.83■□□□□ 0.6
TSPAN9O75954 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN9O75954 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.82■□□□□ 0.6
TSPAN9O75954 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN9O75954 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN9O75954 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN9O75954 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.82■□□□□ 0.6
TSPAN9O75954 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.82■□□□□ 0.6
TSPAN9O75954 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN9O75954 AC096887.2-201ENST00000623443 1957 ntBASIC18.82■□□□□ 0.6
TSPAN9O75954 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TSPAN9O75954 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN9O75954 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN9O75954 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN9O75954 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TSPAN9O75954 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.82■□□□□ 0.6
TSPAN9O75954 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TSPAN9O75954 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.81■□□□□ 0.6
TSPAN9O75954 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TSPAN9O75954 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TSPAN9O75954 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TSPAN9O75954 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.81■□□□□ 0.6
TSPAN9O75954 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.81■□□□□ 0.6
TSPAN9O75954 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TSPAN9O75954 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TSPAN9O75954 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TSPAN9O75954 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TSPAN9O75954 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TSPAN9O75954 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TSPAN9O75954 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
TSPAN9O75954 AC021242.3-201ENST00000607598 1377 ntBASIC18.81■□□□□ 0.6
TSPAN9O75954 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN9O75954 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN9O75954 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.8■□□□□ 0.6
TSPAN9O75954 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.8■□□□□ 0.6
TSPAN9O75954 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN9O75954 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN9O75954 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN9O75954 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TSPAN9O75954 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.79■□□□□ 0.6
TSPAN9O75954 AC007952.6-201ENST00000573168 2673 ntBASIC18.79■□□□□ 0.6
TSPAN9O75954 AC003957.1-201ENST00000625108 2673 ntBASIC18.79■□□□□ 0.6
TSPAN9O75954 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN9O75954 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms