Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NDUFS3O75489 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NDUFS3O75489 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NDUFS3O75489 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
NDUFS3O75489 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NDUFS3O75489 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NDUFS3O75489 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NDUFS3O75489 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NDUFS3O75489 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.02■■□□□ 1.12
NDUFS3O75489 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
NDUFS3O75489 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NDUFS3O75489 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NDUFS3O75489 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
NDUFS3O75489 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NDUFS3O75489 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.11
NDUFS3O75489 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
NDUFS3O75489 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
NDUFS3O75489 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NDUFS3O75489 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
NDUFS3O75489 AC241377.3-202ENST00000626088 1088 ntBASIC22.01■■□□□ 1.11
NDUFS3O75489 AC241585.3-202ENST00000628937 1088 ntBASIC22.01■■□□□ 1.11
NDUFS3O75489 AC245100.8-202ENST00000629247 1058 ntBASIC22.01■■□□□ 1.11
NDUFS3O75489 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.01■■□□□ 1.11
NDUFS3O75489 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NDUFS3O75489 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NDUFS3O75489 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.01■■□□□ 1.11
NDUFS3O75489 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NDUFS3O75489 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NDUFS3O75489 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.01■■□□□ 1.11
NDUFS3O75489 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NDUFS3O75489 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
NDUFS3O75489 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
NDUFS3O75489 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NDUFS3O75489 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NDUFS3O75489 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22■■□□□ 1.11
NDUFS3O75489 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
NDUFS3O75489 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22■■□□□ 1.11
NDUFS3O75489 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NDUFS3O75489 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22■■□□□ 1.11
NDUFS3O75489 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
NDUFS3O75489 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22■■□□□ 1.11
NDUFS3O75489 SRR-208ENST00000576848 588 ntTSL 4 BASIC22■■□□□ 1.11
NDUFS3O75489 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
NDUFS3O75489 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NDUFS3O75489 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
NDUFS3O75489 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
NDUFS3O75489 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NDUFS3O75489 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.99■■□□□ 1.11
NDUFS3O75489 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NDUFS3O75489 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NDUFS3O75489 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
NDUFS3O75489 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
NDUFS3O75489 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NDUFS3O75489 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.98■■□□□ 1.11
NDUFS3O75489 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
NDUFS3O75489 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NDUFS3O75489 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
NDUFS3O75489 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.98■■□□□ 1.11
NDUFS3O75489 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NDUFS3O75489 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NDUFS3O75489 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.98■■□□□ 1.11
NDUFS3O75489 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.98■■□□□ 1.11
NDUFS3O75489 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
NDUFS3O75489 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
NDUFS3O75489 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
NDUFS3O75489 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NDUFS3O75489 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.98■■□□□ 1.11
NDUFS3O75489 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NDUFS3O75489 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
NDUFS3O75489 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NDUFS3O75489 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
NDUFS3O75489 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NDUFS3O75489 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NDUFS3O75489 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NDUFS3O75489 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NDUFS3O75489 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NDUFS3O75489 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.97■■□□□ 1.11
NDUFS3O75489 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NDUFS3O75489 ESRRAP2-201ENST00000418437 1549 ntBASIC21.97■■□□□ 1.11
NDUFS3O75489 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.97■■□□□ 1.11
NDUFS3O75489 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.97■■□□□ 1.11
NDUFS3O75489 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.97■■□□□ 1.11
NDUFS3O75489 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.97■■□□□ 1.11
NDUFS3O75489 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.97■■□□□ 1.11
NDUFS3O75489 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.97■■□□□ 1.11
NDUFS3O75489 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.97■■□□□ 1.11
NDUFS3O75489 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NDUFS3O75489 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NDUFS3O75489 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NDUFS3O75489 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.97■■□□□ 1.11
NDUFS3O75489 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.97■■□□□ 1.11
NDUFS3O75489 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NDUFS3O75489 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NDUFS3O75489 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NDUFS3O75489 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NDUFS3O75489 SRD5A1P1-201ENST00000442297 786 ntBASIC21.96■■□□□ 1.11
NDUFS3O75489 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.96■■□□□ 1.11
NDUFS3O75489 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NDUFS3O75489 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.96■■□□□ 1.11
NDUFS3O75489 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms