Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KLHL41O60662 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.88■■□□□ 1.09
KLHL41O60662 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.88■■□□□ 1.09
KLHL41O60662 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.88■■□□□ 1.09
KLHL41O60662 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
KLHL41O60662 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KLHL41O60662 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.88■■□□□ 1.09
KLHL41O60662 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
KLHL41O60662 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KLHL41O60662 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
KLHL41O60662 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.88■■□□□ 1.09
KLHL41O60662 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KLHL41O60662 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.87■■□□□ 1.09
KLHL41O60662 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KLHL41O60662 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KLHL41O60662 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
KLHL41O60662 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KLHL41O60662 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
KLHL41O60662 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
KLHL41O60662 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KLHL41O60662 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KLHL41O60662 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.87■■□□□ 1.09
KLHL41O60662 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
KLHL41O60662 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.87■■□□□ 1.09
KLHL41O60662 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.87■■□□□ 1.09
KLHL41O60662 MTDHP2-201ENST00000601468 714 ntBASIC21.87■■□□□ 1.09
KLHL41O60662 AC010997.5-201ENST00000609182 354 ntBASIC21.87■■□□□ 1.09
KLHL41O60662 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
KLHL41O60662 AC242852.2-201ENST00000615738 1807 ntBASIC21.87■■□□□ 1.09
KLHL41O60662 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.87■■□□□ 1.09
KLHL41O60662 AC131274.2-201ENST00000580697 1507 ntBASIC21.86■■□□□ 1.09
KLHL41O60662 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.86■■□□□ 1.09
KLHL41O60662 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
KLHL41O60662 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KLHL41O60662 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.86■■□□□ 1.09
KLHL41O60662 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KLHL41O60662 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.86■■□□□ 1.09
KLHL41O60662 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KLHL41O60662 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
KLHL41O60662 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.85■■□□□ 1.09
KLHL41O60662 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
KLHL41O60662 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KLHL41O60662 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KLHL41O60662 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
KLHL41O60662 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
KLHL41O60662 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
KLHL41O60662 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.85■■□□□ 1.09
KLHL41O60662 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.85■■□□□ 1.09
KLHL41O60662 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KLHL41O60662 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.85■■□□□ 1.09
KLHL41O60662 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.85■■□□□ 1.09
KLHL41O60662 MIR6724-1-201ENST00000616420 92 ntBASIC21.85■■□□□ 1.09
KLHL41O60662 MIR6724-2-201ENST00000616483 92 ntBASIC21.85■■□□□ 1.09
KLHL41O60662 MIR6724-4-201ENST00000617390 92 ntBASIC21.85■■□□□ 1.09
KLHL41O60662 MIR6724-3-201ENST00000622482 92 ntBASIC21.85■■□□□ 1.09
KLHL41O60662 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KLHL41O60662 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KLHL41O60662 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KLHL41O60662 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
KLHL41O60662 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KLHL41O60662 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.85■■□□□ 1.09
KLHL41O60662 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
KLHL41O60662 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.84■■□□□ 1.09
KLHL41O60662 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KLHL41O60662 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.84■■□□□ 1.09
KLHL41O60662 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.84■■□□□ 1.09
KLHL41O60662 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.84■■□□□ 1.09
KLHL41O60662 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KLHL41O60662 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.84■■□□□ 1.09
KLHL41O60662 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.84■■□□□ 1.09
KLHL41O60662 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
KLHL41O60662 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KLHL41O60662 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KLHL41O60662 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KLHL41O60662 AL356740.2-201ENST00000601559 647 ntBASIC21.83■■□□□ 1.09
KLHL41O60662 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.83■■□□□ 1.09
KLHL41O60662 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
KLHL41O60662 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KLHL41O60662 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
KLHL41O60662 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
KLHL41O60662 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.82■■□□□ 1.08
KLHL41O60662 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.82■■□□□ 1.08
KLHL41O60662 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.82■■□□□ 1.08
KLHL41O60662 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.82■■□□□ 1.08
KLHL41O60662 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KLHL41O60662 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KLHL41O60662 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KLHL41O60662 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.82■■□□□ 1.08
KLHL41O60662 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
KLHL41O60662 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KLHL41O60662 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KLHL41O60662 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
KLHL41O60662 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
KLHL41O60662 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
KLHL41O60662 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KLHL41O60662 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.81■■□□□ 1.08
KLHL41O60662 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.81■■□□□ 1.08
KLHL41O60662 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.81■■□□□ 1.08
KLHL41O60662 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KLHL41O60662 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms