Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CUBNO60494 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CUBNO60494 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CUBNO60494 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CUBNO60494 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CUBNO60494 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.92■□□□□ 0.46
CUBNO60494 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.92■□□□□ 0.46
CUBNO60494 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CUBNO60494 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CUBNO60494 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.92■□□□□ 0.46
CUBNO60494 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.92■□□□□ 0.46
CUBNO60494 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CUBNO60494 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CUBNO60494 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CUBNO60494 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CUBNO60494 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.92■□□□□ 0.46
CUBNO60494 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.92■□□□□ 0.46
CUBNO60494 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.91■□□□□ 0.46
CUBNO60494 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.91■□□□□ 0.46
CUBNO60494 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CUBNO60494 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CUBNO60494 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CUBNO60494 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CUBNO60494 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CUBNO60494 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.91■□□□□ 0.46
CUBNO60494 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CUBNO60494 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CUBNO60494 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.91■□□□□ 0.46
CUBNO60494 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CUBNO60494 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CUBNO60494 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CUBNO60494 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CUBNO60494 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.91■□□□□ 0.46
CUBNO60494 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CUBNO60494 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CUBNO60494 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CUBNO60494 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.91■□□□□ 0.46
CUBNO60494 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CUBNO60494 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.9■□□□□ 0.46
CUBNO60494 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.9■□□□□ 0.46
CUBNO60494 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.9■□□□□ 0.46
CUBNO60494 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CUBNO60494 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CUBNO60494 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CUBNO60494 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CUBNO60494 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.9■□□□□ 0.46
CUBNO60494 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.9■□□□□ 0.46
CUBNO60494 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
CUBNO60494 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CUBNO60494 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CUBNO60494 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.89■□□□□ 0.45
CUBNO60494 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CUBNO60494 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.89■□□□□ 0.45
CUBNO60494 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
CUBNO60494 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.89■□□□□ 0.45
CUBNO60494 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CUBNO60494 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CUBNO60494 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.89■□□□□ 0.45
CUBNO60494 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.89■□□□□ 0.45
CUBNO60494 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CUBNO60494 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CUBNO60494 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
CUBNO60494 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CUBNO60494 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.88■□□□□ 0.45
CUBNO60494 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.88■□□□□ 0.45
CUBNO60494 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CUBNO60494 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CUBNO60494 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.88■□□□□ 0.45
CUBNO60494 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.88■□□□□ 0.45
CUBNO60494 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CUBNO60494 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CUBNO60494 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CUBNO60494 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.88■□□□□ 0.45
CUBNO60494 RPS2P52-201ENST00000469610 820 ntBASIC17.88■□□□□ 0.45
CUBNO60494 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CUBNO60494 AC105233.4-201ENST00000642045 216 ntBASIC17.88■□□□□ 0.45
CUBNO60494 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.88■□□□□ 0.45
CUBNO60494 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.88■□□□□ 0.45
CUBNO60494 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CUBNO60494 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CUBNO60494 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CUBNO60494 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.87■□□□□ 0.45
CUBNO60494 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CUBNO60494 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.87■□□□□ 0.45
CUBNO60494 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CUBNO60494 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CUBNO60494 PRORSD1P-201ENST00000295112 541 ntBASIC17.87■□□□□ 0.45
CUBNO60494 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CUBNO60494 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.87■□□□□ 0.45
CUBNO60494 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CUBNO60494 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CUBNO60494 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.86■□□□□ 0.45
CUBNO60494 OR2I1P-207ENST00000453522 948 ntBASIC17.86■□□□□ 0.45
CUBNO60494 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.86■□□□□ 0.45
CUBNO60494 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.86■□□□□ 0.45
CUBNO60494 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CUBNO60494 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.86■□□□□ 0.45
CUBNO60494 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.86■□□□□ 0.45
CUBNO60494 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CUBNO60494 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms