Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGA12O60330 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGA12O60330 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.95■■□□□ 1.1
PCDHGA12O60330 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHGA12O60330 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.95■■□□□ 1.1
PCDHGA12O60330 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGA12O60330 AC133637.1-201ENST00000624115 1537 ntBASIC21.95■■□□□ 1.1
PCDHGA12O60330 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGA12O60330 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGA12O60330 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDHGA12O60330 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.94■■□□□ 1.1
PCDHGA12O60330 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA12O60330 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA12O60330 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA12O60330 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHGA12O60330 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHGA12O60330 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.94■■□□□ 1.1
PCDHGA12O60330 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA12O60330 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA12O60330 MIR6084-201ENST00000622012 110 ntBASIC21.94■■□□□ 1.1
PCDHGA12O60330 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA12O60330 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA12O60330 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA12O60330 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA12O60330 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA12O60330 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA12O60330 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
PCDHGA12O60330 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PCDHGA12O60330 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHGA12O60330 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDHGA12O60330 CCDC92B-201ENST00000575506 885 ntBASIC21.93■■□□□ 1.1
PCDHGA12O60330 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDHGA12O60330 AL499627.2-201ENST00000606283 725 ntBASIC21.93■■□□□ 1.1
PCDHGA12O60330 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHGA12O60330 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGA12O60330 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PCDHGA12O60330 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGA12O60330 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGA12O60330 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PCDHGA12O60330 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGA12O60330 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.92■■□□□ 1.1
PCDHGA12O60330 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHGA12O60330 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
PCDHGA12O60330 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDHGA12O60330 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
PCDHGA12O60330 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGA12O60330 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGA12O60330 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGA12O60330 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA12O60330 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA12O60330 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDHGA12O60330 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA12O60330 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA12O60330 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA12O60330 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHGA12O60330 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHGA12O60330 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHGA12O60330 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA12O60330 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA12O60330 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA12O60330 LINC01124-201ENST00000409786 2117 ntBASIC21.91■■□□□ 1.1
PCDHGA12O60330 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA12O60330 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA12O60330 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA12O60330 LINC02228-203ENST00000641970 1355 ntBASIC21.9■■□□□ 1.1
PCDHGA12O60330 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
PCDHGA12O60330 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA12O60330 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
PCDHGA12O60330 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA12O60330 AC004911.1-201ENST00000416316 871 ntBASIC21.9■■□□□ 1.1
PCDHGA12O60330 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.9■■□□□ 1.1
PCDHGA12O60330 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHGA12O60330 NTF6G-201ENST00000591094 616 ntBASIC21.9■■□□□ 1.1
PCDHGA12O60330 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA12O60330 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA12O60330 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHGA12O60330 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHGA12O60330 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGA12O60330 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGA12O60330 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.89■■□□□ 1.09
PCDHGA12O60330 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.89■■□□□ 1.09
PCDHGA12O60330 OR2I1P-207ENST00000453522 948 ntBASIC21.89■■□□□ 1.09
PCDHGA12O60330 TERF1P2-201ENST00000583350 1212 ntBASIC21.89■■□□□ 1.09
PCDHGA12O60330 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGA12O60330 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGA12O60330 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGA12O60330 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHGA12O60330 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGA12O60330 AP003733.4-201ENST00000623785 1697 ntBASIC21.88■■□□□ 1.09
PCDHGA12O60330 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA12O60330 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA12O60330 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA12O60330 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA12O60330 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA12O60330 KRT18P14-201ENST00000534205 1250 ntBASIC21.88■■□□□ 1.09
PCDHGA12O60330 AC012676.1-201ENST00000574705 1949 ntBASIC21.88■■□□□ 1.09
PCDHGA12O60330 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHGA12O60330 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA12O60330 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.88■■□□□ 1.09
PCDHGA12O60330 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms