Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC28A2O43868 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC28A2O43868 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC28A2O43868 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SLC28A2O43868 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC28A2O43868 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC28A2O43868 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
SLC28A2O43868 AC092437.1-201ENST00000624794 1048 ntBASIC21.21■□□□□ 0.99
SLC28A2O43868 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC28A2O43868 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC28A2O43868 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC28A2O43868 ALDH1A3-203ENST00000557963 1670 ntBASIC21.21■□□□□ 0.99
SLC28A2O43868 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC28A2O43868 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC28A2O43868 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SLC28A2O43868 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
SLC28A2O43868 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.2■□□□□ 0.98
SLC28A2O43868 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC28A2O43868 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC28A2O43868 ESRRAP2-201ENST00000418437 1549 ntBASIC21.2■□□□□ 0.98
SLC28A2O43868 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SLC28A2O43868 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.2■□□□□ 0.98
SLC28A2O43868 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.2■□□□□ 0.98
SLC28A2O43868 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.2■□□□□ 0.98
SLC28A2O43868 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SLC28A2O43868 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.2■□□□□ 0.98
SLC28A2O43868 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.2■□□□□ 0.98
SLC28A2O43868 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC28A2O43868 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC28A2O43868 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC28A2O43868 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC28A2O43868 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC28A2O43868 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SLC28A2O43868 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SLC28A2O43868 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SLC28A2O43868 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.19■□□□□ 0.98
SLC28A2O43868 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.19■□□□□ 0.98
SLC28A2O43868 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.19■□□□□ 0.98
SLC28A2O43868 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.19■□□□□ 0.98
SLC28A2O43868 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.19■□□□□ 0.98
SLC28A2O43868 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SLC28A2O43868 AC099791.1-201ENST00000416440 715 ntBASIC21.19■□□□□ 0.98
SLC28A2O43868 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC28A2O43868 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.19■□□□□ 0.98
SLC28A2O43868 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.19■□□□□ 0.98
SLC28A2O43868 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC28A2O43868 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.19■□□□□ 0.98
SLC28A2O43868 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC28A2O43868 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC28A2O43868 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.19■□□□□ 0.98
SLC28A2O43868 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC28A2O43868 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC28A2O43868 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC28A2O43868 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.18■□□□□ 0.98
SLC28A2O43868 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC28A2O43868 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC28A2O43868 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC28A2O43868 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.18■□□□□ 0.98
SLC28A2O43868 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC28A2O43868 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC28A2O43868 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.18■□□□□ 0.98
SLC28A2O43868 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.18■□□□□ 0.98
SLC28A2O43868 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC28A2O43868 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC28A2O43868 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC28A2O43868 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC28A2O43868 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC28A2O43868 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC28A2O43868 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.17■□□□□ 0.98
SLC28A2O43868 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.17■□□□□ 0.98
SLC28A2O43868 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC28A2O43868 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC28A2O43868 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC28A2O43868 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC28A2O43868 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SLC28A2O43868 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC28A2O43868 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
SLC28A2O43868 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC28A2O43868 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SLC28A2O43868 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SLC28A2O43868 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.16■□□□□ 0.98
SLC28A2O43868 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC28A2O43868 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.16■□□□□ 0.98
SLC28A2O43868 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC28A2O43868 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SLC28A2O43868 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC28A2O43868 AC092068.2-201ENST00000590491 1708 ntBASIC21.15■□□□□ 0.98
SLC28A2O43868 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC28A2O43868 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SLC28A2O43868 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.15■□□□□ 0.98
SLC28A2O43868 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC28A2O43868 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC28A2O43868 SERBP1P1-201ENST00000396021 1160 ntBASIC21.15■□□□□ 0.98
SLC28A2O43868 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.15■□□□□ 0.98
SLC28A2O43868 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.15■□□□□ 0.98
SLC28A2O43868 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.15■□□□□ 0.98
SLC28A2O43868 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC28A2O43868 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.15■□□□□ 0.98
SLC28A2O43868 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLC28A2O43868 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms