Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRANK1O15050 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.71■■□□□ 1.39
TRANK1O15050 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRANK1O15050 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRANK1O15050 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TRANK1O15050 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
TRANK1O15050 AC069152.1-201ENST00000438030 544 ntBASIC23.7■■□□□ 1.38
TRANK1O15050 AC135731.1-201ENST00000569415 2548 ntBASIC23.7■■□□□ 1.38
TRANK1O15050 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TRANK1O15050 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TRANK1O15050 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.7■■□□□ 1.38
TRANK1O15050 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRANK1O15050 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRANK1O15050 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRANK1O15050 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRANK1O15050 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
TRANK1O15050 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.69■■□□□ 1.38
TRANK1O15050 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TRANK1O15050 AC073210.2-201ENST00000430369 194 ntBASIC23.69■■□□□ 1.38
TRANK1O15050 AC105233.4-201ENST00000642045 216 ntBASIC23.69■■□□□ 1.38
TRANK1O15050 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.69■■□□□ 1.38
TRANK1O15050 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRANK1O15050 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.69■■□□□ 1.38
TRANK1O15050 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.69■■□□□ 1.38
TRANK1O15050 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
TRANK1O15050 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.68■■□□□ 1.38
TRANK1O15050 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TRANK1O15050 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.68■■□□□ 1.38
TRANK1O15050 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRANK1O15050 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
TRANK1O15050 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.68■■□□□ 1.38
TRANK1O15050 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.68■■□□□ 1.38
TRANK1O15050 AC011767.1-201ENST00000617410 1153 ntBASIC23.68■■□□□ 1.38
TRANK1O15050 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.68■■□□□ 1.38
TRANK1O15050 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.68■■□□□ 1.38
TRANK1O15050 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TRANK1O15050 HLA-L-211ENST00000482052 1765 ntBASIC23.67■■□□□ 1.38
TRANK1O15050 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRANK1O15050 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.67■■□□□ 1.38
TRANK1O15050 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.67■■□□□ 1.38
TRANK1O15050 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRANK1O15050 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRANK1O15050 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.67■■□□□ 1.38
TRANK1O15050 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.67■■□□□ 1.38
TRANK1O15050 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRANK1O15050 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.67■■□□□ 1.38
TRANK1O15050 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.67■■□□□ 1.38
TRANK1O15050 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.67■■□□□ 1.38
TRANK1O15050 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRANK1O15050 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRANK1O15050 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.67■■□□□ 1.38
TRANK1O15050 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TRANK1O15050 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
TRANK1O15050 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.66■■□□□ 1.38
TRANK1O15050 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRANK1O15050 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.66■■□□□ 1.38
TRANK1O15050 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TRANK1O15050 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.66■■□□□ 1.38
TRANK1O15050 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.66■■□□□ 1.38
TRANK1O15050 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TRANK1O15050 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
TRANK1O15050 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.66■■□□□ 1.38
TRANK1O15050 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRANK1O15050 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRANK1O15050 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.66■■□□□ 1.38
TRANK1O15050 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.66■■□□□ 1.38
TRANK1O15050 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRANK1O15050 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRANK1O15050 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRANK1O15050 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.65■■□□□ 1.38
TRANK1O15050 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRANK1O15050 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRANK1O15050 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRANK1O15050 KRT18P11-201ENST00000435214 1283 ntBASIC23.65■■□□□ 1.38
TRANK1O15050 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRANK1O15050 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.65■■□□□ 1.38
TRANK1O15050 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.64■■□□□ 1.38
TRANK1O15050 AC083906.2-201ENST00000511578 360 ntBASIC23.64■■□□□ 1.38
TRANK1O15050 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.64■■□□□ 1.38
TRANK1O15050 BX005040.4-201ENST00000637145 1518 ntBASIC23.64■■□□□ 1.38
TRANK1O15050 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TRANK1O15050 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRANK1O15050 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.64■■□□□ 1.37
TRANK1O15050 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRANK1O15050 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
TRANK1O15050 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
TRANK1O15050 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRANK1O15050 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TRANK1O15050 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRANK1O15050 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRANK1O15050 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRANK1O15050 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.63■■□□□ 1.37
TRANK1O15050 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRANK1O15050 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.63■■□□□ 1.37
TRANK1O15050 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.63■■□□□ 1.37
TRANK1O15050 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.63■■□□□ 1.37
TRANK1O15050 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRANK1O15050 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRANK1O15050 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.62■■□□□ 1.37
TRANK1O15050 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms