Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASQ2O14958 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CASQ2O14958 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASQ2O14958 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.03■□□□□ 0.96
CASQ2O14958 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASQ2O14958 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASQ2O14958 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASQ2O14958 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.03■□□□□ 0.96
CASQ2O14958 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.03■□□□□ 0.96
CASQ2O14958 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CASQ2O14958 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CASQ2O14958 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.03■□□□□ 0.96
CASQ2O14958 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
CASQ2O14958 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CASQ2O14958 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASQ2O14958 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CASQ2O14958 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CASQ2O14958 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CASQ2O14958 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CASQ2O14958 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CASQ2O14958 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CASQ2O14958 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CASQ2O14958 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CASQ2O14958 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CASQ2O14958 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CASQ2O14958 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CASQ2O14958 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.01■□□□□ 0.95
CASQ2O14958 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CASQ2O14958 FAM99A-202ENST00000538190 1989 ntBASIC21.01■□□□□ 0.95
CASQ2O14958 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CASQ2O14958 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CASQ2O14958 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CASQ2O14958 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CASQ2O14958 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.01■□□□□ 0.95
CASQ2O14958 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CASQ2O14958 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CASQ2O14958 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CASQ2O14958 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CASQ2O14958 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CASQ2O14958 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CASQ2O14958 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CASQ2O14958 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21■□□□□ 0.95
CASQ2O14958 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CASQ2O14958 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CASQ2O14958 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CASQ2O14958 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21■□□□□ 0.95
CASQ2O14958 AL157400.5-201ENST00000507624 621 ntBASIC21■□□□□ 0.95
CASQ2O14958 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21■□□□□ 0.95
CASQ2O14958 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CASQ2O14958 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CASQ2O14958 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CASQ2O14958 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CASQ2O14958 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CASQ2O14958 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21■□□□□ 0.95
CASQ2O14958 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CASQ2O14958 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.99■□□□□ 0.95
CASQ2O14958 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CASQ2O14958 AC138932.1-201ENST00000534164 6830 ntBASIC20.99■□□□□ 0.95
CASQ2O14958 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.99■□□□□ 0.95
CASQ2O14958 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.99■□□□□ 0.95
CASQ2O14958 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CASQ2O14958 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CASQ2O14958 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CASQ2O14958 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CASQ2O14958 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CASQ2O14958 AC005229.4-201ENST00000610085 2198 ntBASIC20.98■□□□□ 0.95
CASQ2O14958 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.98■□□□□ 0.95
CASQ2O14958 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CASQ2O14958 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CASQ2O14958 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CASQ2O14958 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CASQ2O14958 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CASQ2O14958 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CASQ2O14958 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CASQ2O14958 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
CASQ2O14958 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CASQ2O14958 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CASQ2O14958 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CASQ2O14958 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CASQ2O14958 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CASQ2O14958 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CASQ2O14958 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CASQ2O14958 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CASQ2O14958 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CASQ2O14958 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CASQ2O14958 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
CASQ2O14958 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.97■□□□□ 0.95
CASQ2O14958 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CASQ2O14958 AC010542.4-201ENST00000563151 1910 ntBASIC20.97■□□□□ 0.95
CASQ2O14958 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CASQ2O14958 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CASQ2O14958 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CASQ2O14958 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CASQ2O14958 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CASQ2O14958 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CASQ2O14958 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CASQ2O14958 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CASQ2O14958 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CASQ2O14958 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CASQ2O14958 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms