Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDX4O14627 BX005040.4-201ENST00000637145 1518 ntBASIC21.68■■□□□ 1.06
CDX4O14627 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.68■■□□□ 1.06
CDX4O14627 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDX4O14627 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.67■■□□□ 1.06
CDX4O14627 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.67■■□□□ 1.06
CDX4O14627 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDX4O14627 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CDX4O14627 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDX4O14627 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.67■■□□□ 1.06
CDX4O14627 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDX4O14627 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDX4O14627 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.67■■□□□ 1.06
CDX4O14627 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDX4O14627 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CDX4O14627 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDX4O14627 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDX4O14627 KRT18P11-201ENST00000435214 1283 ntBASIC21.66■■□□□ 1.06
CDX4O14627 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.66■■□□□ 1.06
CDX4O14627 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.66■■□□□ 1.06
CDX4O14627 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDX4O14627 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.66■■□□□ 1.06
CDX4O14627 DUSP8P4-201ENST00000399538 1761 ntBASIC21.66■■□□□ 1.06
CDX4O14627 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDX4O14627 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDX4O14627 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDX4O14627 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDX4O14627 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDX4O14627 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDX4O14627 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDX4O14627 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDX4O14627 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CDX4O14627 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDX4O14627 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CDX4O14627 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDX4O14627 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDX4O14627 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CDX4O14627 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.65■■□□□ 1.06
CDX4O14627 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDX4O14627 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.65■■□□□ 1.06
CDX4O14627 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.65■■□□□ 1.06
CDX4O14627 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.65■■□□□ 1.06
CDX4O14627 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.65■■□□□ 1.06
CDX4O14627 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDX4O14627 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CDX4O14627 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CDX4O14627 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.64■■□□□ 1.06
CDX4O14627 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.64■■□□□ 1.05
CDX4O14627 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
CDX4O14627 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDX4O14627 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.64■■□□□ 1.05
CDX4O14627 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDX4O14627 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDX4O14627 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDX4O14627 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.63■■□□□ 1.05
CDX4O14627 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.63■■□□□ 1.05
CDX4O14627 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDX4O14627 LINC01529-204ENST00000636474 1715 ntBASIC21.63■■□□□ 1.05
CDX4O14627 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDX4O14627 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDX4O14627 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.62■■□□□ 1.05
CDX4O14627 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
CDX4O14627 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.62■■□□□ 1.05
CDX4O14627 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDX4O14627 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDX4O14627 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.62■■□□□ 1.05
CDX4O14627 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDX4O14627 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDX4O14627 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDX4O14627 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDX4O14627 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CDX4O14627 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDX4O14627 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDX4O14627 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDX4O14627 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CDX4O14627 KRT18P6-201ENST00000555540 1265 ntBASIC21.61■■□□□ 1.05
CDX4O14627 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.61■■□□□ 1.05
CDX4O14627 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDX4O14627 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDX4O14627 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDX4O14627 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDX4O14627 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDX4O14627 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDX4O14627 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CDX4O14627 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDX4O14627 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDX4O14627 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.6■■□□□ 1.05
CDX4O14627 AC144652.1-201ENST00000609974 1624 ntBASIC21.6■■□□□ 1.05
CDX4O14627 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDX4O14627 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.6■■□□□ 1.05
CDX4O14627 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CDX4O14627 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDX4O14627 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.6■■□□□ 1.05
CDX4O14627 AL121832.2-201ENST00000610979 668 ntBASIC21.6■■□□□ 1.05
CDX4O14627 AL050303.2-201ENST00000619798 666 ntBASIC21.6■■□□□ 1.05
CDX4O14627 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDX4O14627 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CDX4O14627 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CDX4O14627 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDX4O14627 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms