Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.98■■□□□ 1.43
SOX1O00570 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
SOX1O00570 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SOX1O00570 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.98■■□□□ 1.43
SOX1O00570 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SOX1O00570 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SOX1O00570 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
SOX1O00570 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.98■■□□□ 1.43
SOX1O00570 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SOX1O00570 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SOX1O00570 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
SOX1O00570 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.97■■□□□ 1.43
SOX1O00570 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.97■■□□□ 1.43
SOX1O00570 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SOX1O00570 ABCB10P1-201ENST00000614297 2181 ntBASIC23.96■■□□□ 1.43
SOX1O00570 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SOX1O00570 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SOX1O00570 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SOX1O00570 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SOX1O00570 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.96■■□□□ 1.43
SOX1O00570 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.96■■□□□ 1.43
SOX1O00570 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SOX1O00570 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.96■■□□□ 1.43
SOX1O00570 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.96■■□□□ 1.43
SOX1O00570 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.96■■□□□ 1.43
SOX1O00570 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.96■■□□□ 1.43
SOX1O00570 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SOX1O00570 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.96■■□□□ 1.43
SOX1O00570 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
SOX1O00570 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.95■■□□□ 1.42
SOX1O00570 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SOX1O00570 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SOX1O00570 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
SOX1O00570 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.95■■□□□ 1.42
SOX1O00570 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.95■■□□□ 1.42
SOX1O00570 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SOX1O00570 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.95■■□□□ 1.42
SOX1O00570 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
SOX1O00570 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SOX1O00570 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.94■■□□□ 1.42
SOX1O00570 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SOX1O00570 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
SOX1O00570 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.94■■□□□ 1.42
SOX1O00570 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
SOX1O00570 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SOX1O00570 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SOX1O00570 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SOX1O00570 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SOX1O00570 ESRRAP1-201ENST00000400596 1257 ntBASIC23.93■■□□□ 1.42
SOX1O00570 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SOX1O00570 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.93■■□□□ 1.42
SOX1O00570 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.93■■□□□ 1.42
SOX1O00570 AC133552.2-202ENST00000575694 574 ntBASIC23.93■■□□□ 1.42
SOX1O00570 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SOX1O00570 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SOX1O00570 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SOX1O00570 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SOX1O00570 UNC93B4-201ENST00000505679 747 ntBASIC23.92■■□□□ 1.42
SOX1O00570 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
SOX1O00570 MIR4758-201ENST00000577688 71 ntBASIC23.92■■□□□ 1.42
SOX1O00570 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
SOX1O00570 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.92■■□□□ 1.42
SOX1O00570 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
SOX1O00570 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.92■■□□□ 1.42
SOX1O00570 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SOX1O00570 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SOX1O00570 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SOX1O00570 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.91■■□□□ 1.42
SOX1O00570 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SOX1O00570 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.91■■□□□ 1.42
SOX1O00570 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SOX1O00570 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SOX1O00570 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
SOX1O00570 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.91■■□□□ 1.42
SOX1O00570 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.91■■□□□ 1.42
SOX1O00570 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
SOX1O00570 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.91■■□□□ 1.42
SOX1O00570 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
SOX1O00570 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SOX1O00570 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SOX1O00570 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.9■■□□□ 1.42
SOX1O00570 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
SOX1O00570 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.9■■□□□ 1.42
SOX1O00570 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SOX1O00570 AC079140.4-201ENST00000507448 529 ntBASIC23.9■■□□□ 1.42
SOX1O00570 UBE2DNL-204ENST00000602536 740 ntBASIC23.9■■□□□ 1.42
SOX1O00570 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SOX1O00570 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SOX1O00570 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
SOX1O00570 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.42
SOX1O00570 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
SOX1O00570 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.89■■□□□ 1.41
SOX1O00570 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SOX1O00570 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SOX1O00570 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
SOX1O00570 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
SOX1O00570 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.89■■□□□ 1.41
SOX1O00570 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.89■■□□□ 1.41
SOX1O00570 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC23.89■■□□□ 1.41
SOX1O00570 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms