Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC096887.2-201ENST00000623443 1957 ntBASIC12.43□□□□□ -0.42
CHKB-CPT1BH3BT56 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHKB-CPT1BH3BT56 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHKB-CPT1BH3BT56 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC12.43□□□□□ -0.42
CHKB-CPT1BH3BT56 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
CHKB-CPT1BH3BT56 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHKB-CPT1BH3BT56 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
CHKB-CPT1BH3BT56 WASH5P-204ENST00000632292 975 ntBASIC12.43□□□□□ -0.42
CHKB-CPT1BH3BT56 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHKB-CPT1BH3BT56 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHKB-CPT1BH3BT56 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC12.43□□□□□ -0.42
CHKB-CPT1BH3BT56 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CHKB-CPT1BH3BT56 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC12.43□□□□□ -0.42
CHKB-CPT1BH3BT56 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC12.43□□□□□ -0.42
CHKB-CPT1BH3BT56 AC007952.6-201ENST00000573168 2673 ntBASIC12.43□□□□□ -0.42
CHKB-CPT1BH3BT56 AC003957.1-201ENST00000625108 2673 ntBASIC12.43□□□□□ -0.42
CHKB-CPT1BH3BT56 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHKB-CPT1BH3BT56 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHKB-CPT1BH3BT56 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CHKB-CPT1BH3BT56 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHKB-CPT1BH3BT56 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC12.42□□□□□ -0.42
CHKB-CPT1BH3BT56 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHKB-CPT1BH3BT56 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHKB-CPT1BH3BT56 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHKB-CPT1BH3BT56 AP003733.4-201ENST00000623785 1697 ntBASIC12.42□□□□□ -0.42
CHKB-CPT1BH3BT56 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHKB-CPT1BH3BT56 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHKB-CPT1BH3BT56 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHKB-CPT1BH3BT56 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHKB-CPT1BH3BT56 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHKB-CPT1BH3BT56 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CHKB-CPT1BH3BT56 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHKB-CPT1BH3BT56 AC142472.1-201ENST00000612013 1741 ntBASIC12.42□□□□□ -0.42
CHKB-CPT1BH3BT56 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHKB-CPT1BH3BT56 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHKB-CPT1BH3BT56 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHKB-CPT1BH3BT56 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHKB-CPT1BH3BT56 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHKB-CPT1BH3BT56 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CHKB-CPT1BH3BT56 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHKB-CPT1BH3BT56 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHKB-CPT1BH3BT56 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHKB-CPT1BH3BT56 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CHKB-CPT1BH3BT56 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHKB-CPT1BH3BT56 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHKB-CPT1BH3BT56 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHKB-CPT1BH3BT56 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHKB-CPT1BH3BT56 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHKB-CPT1BH3BT56 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHKB-CPT1BH3BT56 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHKB-CPT1BH3BT56 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
CHKB-CPT1BH3BT56 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHKB-CPT1BH3BT56 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHKB-CPT1BH3BT56 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHKB-CPT1BH3BT56 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CHKB-CPT1BH3BT56 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CHKB-CPT1BH3BT56 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CHKB-CPT1BH3BT56 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHKB-CPT1BH3BT56 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHKB-CPT1BH3BT56 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHKB-CPT1BH3BT56 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC12.4□□□□□ -0.42
CHKB-CPT1BH3BT56 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHKB-CPT1BH3BT56 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC12.4□□□□□ -0.42
CHKB-CPT1BH3BT56 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
CHKB-CPT1BH3BT56 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHKB-CPT1BH3BT56 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHKB-CPT1BH3BT56 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHKB-CPT1BH3BT56 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHKB-CPT1BH3BT56 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC12.4□□□□□ -0.42
CHKB-CPT1BH3BT56 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC12.4□□□□□ -0.42
CHKB-CPT1BH3BT56 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHKB-CPT1BH3BT56 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CHKB-CPT1BH3BT56 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHKB-CPT1BH3BT56 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CHKB-CPT1BH3BT56 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC12.4□□□□□ -0.42
CHKB-CPT1BH3BT56 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CHKB-CPT1BH3BT56 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CHKB-CPT1BH3BT56 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHKB-CPT1BH3BT56 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CHKB-CPT1BH3BT56 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHKB-CPT1BH3BT56 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHKB-CPT1BH3BT56 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC12.39□□□□□ -0.43
CHKB-CPT1BH3BT56 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
CHKB-CPT1BH3BT56 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHKB-CPT1BH3BT56 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CHKB-CPT1BH3BT56 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHKB-CPT1BH3BT56 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CHKB-CPT1BH3BT56 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CHKB-CPT1BH3BT56 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
CHKB-CPT1BH3BT56 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CHKB-CPT1BH3BT56 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
CHKB-CPT1BH3BT56 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CHKB-CPT1BH3BT56 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CHKB-CPT1BH3BT56 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
CHKB-CPT1BH3BT56 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHKB-CPT1BH3BT56 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHKB-CPT1BH3BT56 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CHKB-CPT1BH3BT56 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHKB-CPT1BH3BT56 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CHKB-CPT1BH3BT56 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms