Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
C1QTNF9BB2RNN3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
C1QTNF9BB2RNN3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
C1QTNF9BB2RNN3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
C1QTNF9BB2RNN3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.06■□□□□ 0.96
C1QTNF9BB2RNN3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
C1QTNF9BB2RNN3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
C1QTNF9BB2RNN3 DUSP5P2-201ENST00000426873 1033 ntBASIC21.06■□□□□ 0.96
C1QTNF9BB2RNN3 AC073210.2-201ENST00000430369 194 ntBASIC21.06■□□□□ 0.96
C1QTNF9BB2RNN3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
C1QTNF9BB2RNN3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.06■□□□□ 0.96
C1QTNF9BB2RNN3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
C1QTNF9BB2RNN3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
C1QTNF9BB2RNN3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
C1QTNF9BB2RNN3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
C1QTNF9BB2RNN3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
C1QTNF9BB2RNN3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
C1QTNF9BB2RNN3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
C1QTNF9BB2RNN3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.05■□□□□ 0.96
C1QTNF9BB2RNN3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
C1QTNF9BB2RNN3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
C1QTNF9BB2RNN3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
C1QTNF9BB2RNN3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.04■□□□□ 0.96
C1QTNF9BB2RNN3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
C1QTNF9BB2RNN3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
C1QTNF9BB2RNN3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
C1QTNF9BB2RNN3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
C1QTNF9BB2RNN3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
C1QTNF9BB2RNN3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
C1QTNF9BB2RNN3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
C1QTNF9BB2RNN3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.03■□□□□ 0.96
C1QTNF9BB2RNN3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
C1QTNF9BB2RNN3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
C1QTNF9BB2RNN3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.03■□□□□ 0.96
C1QTNF9BB2RNN3 MIR1224-201ENST00000408193 85 ntBASIC21.03■□□□□ 0.96
C1QTNF9BB2RNN3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
C1QTNF9BB2RNN3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.03■□□□□ 0.96
C1QTNF9BB2RNN3 RPS2P4-201ENST00000476944 856 ntBASIC21.03■□□□□ 0.96
C1QTNF9BB2RNN3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.03■□□□□ 0.96
C1QTNF9BB2RNN3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
C1QTNF9BB2RNN3 DUX4L16-201ENST00000555130 1264 ntBASIC21.03■□□□□ 0.96
C1QTNF9BB2RNN3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.03■□□□□ 0.96
C1QTNF9BB2RNN3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
C1QTNF9BB2RNN3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.03■□□□□ 0.96
C1QTNF9BB2RNN3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
C1QTNF9BB2RNN3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
C1QTNF9BB2RNN3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.02■□□□□ 0.96
C1QTNF9BB2RNN3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
C1QTNF9BB2RNN3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
C1QTNF9BB2RNN3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
C1QTNF9BB2RNN3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
C1QTNF9BB2RNN3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
C1QTNF9BB2RNN3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
C1QTNF9BB2RNN3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.02■□□□□ 0.96
C1QTNF9BB2RNN3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.02■□□□□ 0.96
C1QTNF9BB2RNN3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.02■□□□□ 0.96
C1QTNF9BB2RNN3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.02■□□□□ 0.96
C1QTNF9BB2RNN3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
C1QTNF9BB2RNN3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
C1QTNF9BB2RNN3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
C1QTNF9BB2RNN3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
C1QTNF9BB2RNN3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
C1QTNF9BB2RNN3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
C1QTNF9BB2RNN3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
C1QTNF9BB2RNN3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
C1QTNF9BB2RNN3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
C1QTNF9BB2RNN3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
C1QTNF9BB2RNN3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.01■□□□□ 0.95
C1QTNF9BB2RNN3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.01■□□□□ 0.95
C1QTNF9BB2RNN3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
C1QTNF9BB2RNN3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
C1QTNF9BB2RNN3 GCSHP5-201ENST00000443090 522 ntBASIC21.01■□□□□ 0.95
C1QTNF9BB2RNN3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.01■□□□□ 0.95
C1QTNF9BB2RNN3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.01■□□□□ 0.95
C1QTNF9BB2RNN3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
C1QTNF9BB2RNN3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
C1QTNF9BB2RNN3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.01■□□□□ 0.95
C1QTNF9BB2RNN3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
C1QTNF9BB2RNN3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
C1QTNF9BB2RNN3 BX005040.4-201ENST00000637145 1518 ntBASIC21■□□□□ 0.95
C1QTNF9BB2RNN3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
C1QTNF9BB2RNN3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21■□□□□ 0.95
C1QTNF9BB2RNN3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21■□□□□ 0.95
C1QTNF9BB2RNN3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21■□□□□ 0.95
C1QTNF9BB2RNN3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21■□□□□ 0.95
C1QTNF9BB2RNN3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21■□□□□ 0.95
C1QTNF9BB2RNN3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21■□□□□ 0.95
C1QTNF9BB2RNN3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
C1QTNF9BB2RNN3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
C1QTNF9BB2RNN3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
C1QTNF9BB2RNN3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
C1QTNF9BB2RNN3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
C1QTNF9BB2RNN3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C1QTNF9BB2RNN3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
C1QTNF9BB2RNN3 SLC7A5P1-201ENST00000568957 537 ntBASIC20.99■□□□□ 0.95
C1QTNF9BB2RNN3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.98■□□□□ 0.95
C1QTNF9BB2RNN3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.98■□□□□ 0.95
C1QTNF9BB2RNN3 AF201337.1-201ENST00000520239 748 ntBASIC20.98■□□□□ 0.95
C1QTNF9BB2RNN3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.98■□□□□ 0.95
C1QTNF9BB2RNN3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms