Protein–RNA interactions for Protein: A6NLE4

SMIM23, Small integral membrane protein 23, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM23A6NLE4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SMIM23A6NLE4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMIM23A6NLE4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMIM23A6NLE4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMIM23A6NLE4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.63■■□□□ 1.21
SMIM23A6NLE4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.63■■□□□ 1.21
SMIM23A6NLE4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMIM23A6NLE4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMIM23A6NLE4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMIM23A6NLE4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
SMIM23A6NLE4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMIM23A6NLE4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.62■■□□□ 1.21
SMIM23A6NLE4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.62■■□□□ 1.21
SMIM23A6NLE4 MIR6765-201ENST00000614092 87 ntBASIC22.62■■□□□ 1.21
SMIM23A6NLE4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.62■■□□□ 1.21
SMIM23A6NLE4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMIM23A6NLE4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMIM23A6NLE4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMIM23A6NLE4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.62■■□□□ 1.21
SMIM23A6NLE4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SMIM23A6NLE4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.62■■□□□ 1.21
SMIM23A6NLE4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SMIM23A6NLE4 AL353803.4-201ENST00000565882 1934 ntBASIC22.61■■□□□ 1.21
SMIM23A6NLE4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMIM23A6NLE4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.61■■□□□ 1.21
SMIM23A6NLE4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.61■■□□□ 1.21
SMIM23A6NLE4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SMIM23A6NLE4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
SMIM23A6NLE4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SMIM23A6NLE4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SMIM23A6NLE4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMIM23A6NLE4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SMIM23A6NLE4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.6■■□□□ 1.21
SMIM23A6NLE4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SMIM23A6NLE4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SMIM23A6NLE4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SMIM23A6NLE4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
SMIM23A6NLE4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.59■■□□□ 1.21
SMIM23A6NLE4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SMIM23A6NLE4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SMIM23A6NLE4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SMIM23A6NLE4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.59■■□□□ 1.21
SMIM23A6NLE4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SMIM23A6NLE4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
SMIM23A6NLE4 DUX4L9-201ENST00000449051 1259 ntBASIC22.59■■□□□ 1.21
SMIM23A6NLE4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.59■■□□□ 1.21
SMIM23A6NLE4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SMIM23A6NLE4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SMIM23A6NLE4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.59■■□□□ 1.21
SMIM23A6NLE4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.59■■□□□ 1.21
SMIM23A6NLE4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SMIM23A6NLE4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
SMIM23A6NLE4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SMIM23A6NLE4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SMIM23A6NLE4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SMIM23A6NLE4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.58■■□□□ 1.21
SMIM23A6NLE4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SMIM23A6NLE4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SMIM23A6NLE4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.21
SMIM23A6NLE4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.58■■□□□ 1.21
SMIM23A6NLE4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.58■■□□□ 1.21
SMIM23A6NLE4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.58■■□□□ 1.21
SMIM23A6NLE4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.58■■□□□ 1.21
SMIM23A6NLE4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SMIM23A6NLE4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.58■■□□□ 1.2
SMIM23A6NLE4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
SMIM23A6NLE4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SMIM23A6NLE4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SMIM23A6NLE4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.57■■□□□ 1.2
SMIM23A6NLE4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.57■■□□□ 1.2
SMIM23A6NLE4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.57■■□□□ 1.2
SMIM23A6NLE4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.57■■□□□ 1.2
SMIM23A6NLE4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SMIM23A6NLE4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SMIM23A6NLE4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
SMIM23A6NLE4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.57■■□□□ 1.2
SMIM23A6NLE4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMIM23A6NLE4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMIM23A6NLE4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SMIM23A6NLE4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.57■■□□□ 1.2
SMIM23A6NLE4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.57■■□□□ 1.2
SMIM23A6NLE4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
SMIM23A6NLE4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.56■■□□□ 1.2
SMIM23A6NLE4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMIM23A6NLE4 LONRF2P2-201ENST00000439212 571 ntBASIC22.56■■□□□ 1.2
SMIM23A6NLE4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
SMIM23A6NLE4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
SMIM23A6NLE4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMIM23A6NLE4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SMIM23A6NLE4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMIM23A6NLE4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMIM23A6NLE4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.55■■□□□ 1.2
SMIM23A6NLE4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
SMIM23A6NLE4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.55■■□□□ 1.2
SMIM23A6NLE4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
SMIM23A6NLE4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SMIM23A6NLE4 AC011551.1-201ENST00000614101 683 ntBASIC22.55■■□□□ 1.2
SMIM23A6NLE4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SMIM23A6NLE4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.54■■□□□ 1.2
SMIM23A6NLE4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms