Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.78■□□□□ 0.92
PRAMEF25A6NGN4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.78■□□□□ 0.92
PRAMEF25A6NGN4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.78■□□□□ 0.92
PRAMEF25A6NGN4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEF25A6NGN4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.78■□□□□ 0.92
PRAMEF25A6NGN4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEF25A6NGN4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEF25A6NGN4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEF25A6NGN4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRAMEF25A6NGN4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.77■□□□□ 0.92
PRAMEF25A6NGN4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.77■□□□□ 0.92
PRAMEF25A6NGN4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.77■□□□□ 0.92
PRAMEF25A6NGN4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PRAMEF25A6NGN4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PRAMEF25A6NGN4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.77■□□□□ 0.92
PRAMEF25A6NGN4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PRAMEF25A6NGN4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRAMEF25A6NGN4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRAMEF25A6NGN4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
PRAMEF25A6NGN4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PRAMEF25A6NGN4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PRAMEF25A6NGN4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF25A6NGN4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF25A6NGN4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.76■□□□□ 0.91
PRAMEF25A6NGN4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.76■□□□□ 0.91
PRAMEF25A6NGN4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.76■□□□□ 0.91
PRAMEF25A6NGN4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF25A6NGN4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF25A6NGN4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF25A6NGN4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF25A6NGN4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PRAMEF25A6NGN4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF25A6NGN4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PRAMEF25A6NGN4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF25A6NGN4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF25A6NGN4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF25A6NGN4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.75■□□□□ 0.91
PRAMEF25A6NGN4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.75■□□□□ 0.91
PRAMEF25A6NGN4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF25A6NGN4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF25A6NGN4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF25A6NGN4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF25A6NGN4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
PRAMEF25A6NGN4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.75■□□□□ 0.91
PRAMEF25A6NGN4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.74■□□□□ 0.91
PRAMEF25A6NGN4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.74■□□□□ 0.91
PRAMEF25A6NGN4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF25A6NGN4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.74■□□□□ 0.91
PRAMEF25A6NGN4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.74■□□□□ 0.91
PRAMEF25A6NGN4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.74■□□□□ 0.91
PRAMEF25A6NGN4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.74■□□□□ 0.91
PRAMEF25A6NGN4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF25A6NGN4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF25A6NGN4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF25A6NGN4 AC131281.2-201ENST00000520478 145 ntBASIC20.74■□□□□ 0.91
PRAMEF25A6NGN4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.74■□□□□ 0.91
PRAMEF25A6NGN4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF25A6NGN4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF25A6NGN4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PRAMEF25A6NGN4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF25A6NGN4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF25A6NGN4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF25A6NGN4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.73■□□□□ 0.91
PRAMEF25A6NGN4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF25A6NGN4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF25A6NGN4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF25A6NGN4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PRAMEF25A6NGN4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.73■□□□□ 0.91
PRAMEF25A6NGN4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF25A6NGN4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF25A6NGN4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
PRAMEF25A6NGN4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF25A6NGN4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF25A6NGN4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.73■□□□□ 0.91
PRAMEF25A6NGN4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF25A6NGN4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF25A6NGN4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.72■□□□□ 0.91
PRAMEF25A6NGN4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.72■□□□□ 0.91
PRAMEF25A6NGN4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.72■□□□□ 0.91
PRAMEF25A6NGN4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.72■□□□□ 0.91
PRAMEF25A6NGN4 AL512631.2-201ENST00000604634 923 ntBASIC20.72■□□□□ 0.91
PRAMEF25A6NGN4 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.72■□□□□ 0.91
PRAMEF25A6NGN4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF25A6NGN4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF25A6NGN4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF25A6NGN4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF25A6NGN4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF25A6NGN4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PRAMEF25A6NGN4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF25A6NGN4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF25A6NGN4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF25A6NGN4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF25A6NGN4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF25A6NGN4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.71■□□□□ 0.91
PRAMEF25A6NGN4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PRAMEF25A6NGN4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF25A6NGN4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PRAMEF25A6NGN4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF25A6NGN4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF25A6NGN4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms