Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
LRIT2A6NDA9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.1■□□□□ 0.97
LRIT2A6NDA9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRIT2A6NDA9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.1■□□□□ 0.97
LRIT2A6NDA9 SYT6-210ENST00000641643 1587 ntBASIC21.1■□□□□ 0.97
LRIT2A6NDA9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRIT2A6NDA9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRIT2A6NDA9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRIT2A6NDA9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
LRIT2A6NDA9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRIT2A6NDA9 AC004687.1-201ENST00000579003 1625 ntBASIC21.09■□□□□ 0.97
LRIT2A6NDA9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRIT2A6NDA9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRIT2A6NDA9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRIT2A6NDA9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.09■□□□□ 0.97
LRIT2A6NDA9 AC133637.1-201ENST00000624115 1537 ntBASIC21.09■□□□□ 0.97
LRIT2A6NDA9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
LRIT2A6NDA9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.09■□□□□ 0.97
LRIT2A6NDA9 C1orf229-201ENST00000623686 2258 ntBASIC21.08■□□□□ 0.97
LRIT2A6NDA9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
LRIT2A6NDA9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRIT2A6NDA9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.08■□□□□ 0.97
LRIT2A6NDA9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRIT2A6NDA9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRIT2A6NDA9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
LRIT2A6NDA9 SERBP1P1-201ENST00000396021 1160 ntBASIC21.08■□□□□ 0.97
LRIT2A6NDA9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.08■□□□□ 0.97
LRIT2A6NDA9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRIT2A6NDA9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.08■□□□□ 0.96
LRIT2A6NDA9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
LRIT2A6NDA9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
LRIT2A6NDA9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRIT2A6NDA9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.07■□□□□ 0.96
LRIT2A6NDA9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRIT2A6NDA9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRIT2A6NDA9 AC133561.1-201ENST00000568600 2415 ntBASIC21.07■□□□□ 0.96
LRIT2A6NDA9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.07■□□□□ 0.96
LRIT2A6NDA9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRIT2A6NDA9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRIT2A6NDA9 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.07■□□□□ 0.96
LRIT2A6NDA9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.07■□□□□ 0.96
LRIT2A6NDA9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.07■□□□□ 0.96
LRIT2A6NDA9 AL138724.1-201ENST00000606771 1088 ntBASIC21.07■□□□□ 0.96
LRIT2A6NDA9 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.07■□□□□ 0.96
LRIT2A6NDA9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRIT2A6NDA9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.07■□□□□ 0.96
LRIT2A6NDA9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRIT2A6NDA9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.07■□□□□ 0.96
LRIT2A6NDA9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
LRIT2A6NDA9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.07■□□□□ 0.96
LRIT2A6NDA9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.07■□□□□ 0.96
LRIT2A6NDA9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.06■□□□□ 0.96
LRIT2A6NDA9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRIT2A6NDA9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.06■□□□□ 0.96
LRIT2A6NDA9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
LRIT2A6NDA9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRIT2A6NDA9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.06■□□□□ 0.96
LRIT2A6NDA9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRIT2A6NDA9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.05■□□□□ 0.96
LRIT2A6NDA9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
LRIT2A6NDA9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRIT2A6NDA9 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.05■□□□□ 0.96
LRIT2A6NDA9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRIT2A6NDA9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.05■□□□□ 0.96
LRIT2A6NDA9 AC012676.1-201ENST00000574705 1949 ntBASIC21.05■□□□□ 0.96
LRIT2A6NDA9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
LRIT2A6NDA9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRIT2A6NDA9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRIT2A6NDA9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
LRIT2A6NDA9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.05■□□□□ 0.96
LRIT2A6NDA9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRIT2A6NDA9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRIT2A6NDA9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRIT2A6NDA9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.04■□□□□ 0.96
LRIT2A6NDA9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
LRIT2A6NDA9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRIT2A6NDA9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
LRIT2A6NDA9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRIT2A6NDA9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRIT2A6NDA9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRIT2A6NDA9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
LRIT2A6NDA9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LRIT2A6NDA9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
LRIT2A6NDA9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRIT2A6NDA9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
LRIT2A6NDA9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRIT2A6NDA9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRIT2A6NDA9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRIT2A6NDA9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
LRIT2A6NDA9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRIT2A6NDA9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRIT2A6NDA9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.03■□□□□ 0.96
LRIT2A6NDA9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRIT2A6NDA9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.03■□□□□ 0.96
LRIT2A6NDA9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
LRIT2A6NDA9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRIT2A6NDA9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
LRIT2A6NDA9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRIT2A6NDA9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.03■□□□□ 0.96
LRIT2A6NDA9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms