Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 DENND3-207ENST00000518347 850 ntTSL 2 BASIC26.55■■□□□ 1.84
CLRN2A0PK11 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC26.55■■□□□ 1.84
CLRN2A0PK11 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
CLRN2A0PK11 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
CLRN2A0PK11 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CLRN2A0PK11 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CLRN2A0PK11 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.55■■□□□ 1.84
CLRN2A0PK11 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CLRN2A0PK11 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CLRN2A0PK11 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
CLRN2A0PK11 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CLRN2A0PK11 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
CLRN2A0PK11 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.54■■□□□ 1.84
CLRN2A0PK11 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CLRN2A0PK11 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CLRN2A0PK11 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CLRN2A0PK11 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC26.53■■□□□ 1.84
CLRN2A0PK11 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
CLRN2A0PK11 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC26.53■■□□□ 1.84
CLRN2A0PK11 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CLRN2A0PK11 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC26.53■■□□□ 1.84
CLRN2A0PK11 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CLRN2A0PK11 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC26.52■■□□□ 1.84
CLRN2A0PK11 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.52■■□□□ 1.84
CLRN2A0PK11 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CLRN2A0PK11 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
CLRN2A0PK11 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.51■■□□□ 1.83
CLRN2A0PK11 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CLRN2A0PK11 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CLRN2A0PK11 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CLRN2A0PK11 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CLRN2A0PK11 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CLRN2A0PK11 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC26.51■■□□□ 1.83
CLRN2A0PK11 HLA-L-209ENST00000420110 1011 ntBASIC26.51■■□□□ 1.83
CLRN2A0PK11 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CLRN2A0PK11 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CLRN2A0PK11 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.5■■□□□ 1.83
CLRN2A0PK11 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CLRN2A0PK11 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CLRN2A0PK11 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
CLRN2A0PK11 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC26.5■■□□□ 1.83
CLRN2A0PK11 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC26.5■■□□□ 1.83
CLRN2A0PK11 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC26.5■■□□□ 1.83
CLRN2A0PK11 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CLRN2A0PK11 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CLRN2A0PK11 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.49■■□□□ 1.83
CLRN2A0PK11 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.49■■□□□ 1.83
CLRN2A0PK11 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CLRN2A0PK11 AC142381.3-201ENST00000568208 1670 ntBASIC26.49■■□□□ 1.83
CLRN2A0PK11 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
CLRN2A0PK11 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CLRN2A0PK11 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
CLRN2A0PK11 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CLRN2A0PK11 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CLRN2A0PK11 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.48■■□□□ 1.83
CLRN2A0PK11 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC26.48■■□□□ 1.83
CLRN2A0PK11 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC26.48■■□□□ 1.83
CLRN2A0PK11 AC080038.1-201ENST00000611274 1154 ntBASIC26.48■■□□□ 1.83
CLRN2A0PK11 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
CLRN2A0PK11 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
CLRN2A0PK11 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.48■■□□□ 1.83
CLRN2A0PK11 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CLRN2A0PK11 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CLRN2A0PK11 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
CLRN2A0PK11 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CLRN2A0PK11 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC26.47■■□□□ 1.83
CLRN2A0PK11 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CLRN2A0PK11 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC26.47■■□□□ 1.83
CLRN2A0PK11 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC26.47■■□□□ 1.83
CLRN2A0PK11 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC26.47■■□□□ 1.83
CLRN2A0PK11 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC26.47■■□□□ 1.83
CLRN2A0PK11 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC26.47■■□□□ 1.83
CLRN2A0PK11 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC26.47■■□□□ 1.83
CLRN2A0PK11 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC26.47■■□□□ 1.83
CLRN2A0PK11 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC26.47■■□□□ 1.83
CLRN2A0PK11 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CLRN2A0PK11 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CLRN2A0PK11 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CLRN2A0PK11 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC26.46■■□□□ 1.83
CLRN2A0PK11 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC26.46■■□□□ 1.83
CLRN2A0PK11 TPRG1LP1-201ENST00000598702 760 ntBASIC26.46■■□□□ 1.83
CLRN2A0PK11 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC26.46■■□□□ 1.83
CLRN2A0PK11 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CLRN2A0PK11 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CLRN2A0PK11 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CLRN2A0PK11 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CLRN2A0PK11 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CLRN2A0PK11 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC26.45■■□□□ 1.82
CLRN2A0PK11 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
CLRN2A0PK11 AC006015.1-201ENST00000429970 570 ntBASIC26.45■■□□□ 1.82
CLRN2A0PK11 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC26.45■■□□□ 1.82
CLRN2A0PK11 GALNS-213ENST00000569433 723 ntTSL 3 BASIC26.45■■□□□ 1.82
CLRN2A0PK11 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CLRN2A0PK11 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CLRN2A0PK11 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CLRN2A0PK11 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.45■■□□□ 1.82
CLRN2A0PK11 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CLRN2A0PK11 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC26.44■■□□□ 1.82
CLRN2A0PK11 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CLRN2A0PK11 AC137761.2-201ENST00000561729 223 ntBASIC26.44■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms