Protein–RNA interactions for Protein: A0A183

LCE6A, Late cornified envelope protein 6A, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE6AA0A183 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.32■□□□□ 0.04
LCE6AA0A183 DUX4L16-201ENST00000555130 1264 ntBASIC15.32■□□□□ 0.04
LCE6AA0A183 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.32■□□□□ 0.04
LCE6AA0A183 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LCE6AA0A183 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCE6AA0A183 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC15.32■□□□□ 0.04
LCE6AA0A183 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
LCE6AA0A183 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LCE6AA0A183 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCE6AA0A183 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCE6AA0A183 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LCE6AA0A183 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCE6AA0A183 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC15.31■□□□□ 0.04
LCE6AA0A183 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCE6AA0A183 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCE6AA0A183 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
LCE6AA0A183 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCE6AA0A183 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCE6AA0A183 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.31■□□□□ 0.04
LCE6AA0A183 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.31■□□□□ 0.04
LCE6AA0A183 AL596275.1-201ENST00000423464 877 ntBASIC15.31■□□□□ 0.04
LCE6AA0A183 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCE6AA0A183 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.31■□□□□ 0.04
LCE6AA0A183 RNA5SP413-201ENST00000516373 109 ntBASIC15.31■□□□□ 0.04
LCE6AA0A183 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.31■□□□□ 0.04
LCE6AA0A183 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
LCE6AA0A183 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LCE6AA0A183 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCE6AA0A183 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.31■□□□□ 0.04
LCE6AA0A183 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCE6AA0A183 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.3■□□□□ 0.04
LCE6AA0A183 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCE6AA0A183 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCE6AA0A183 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.3■□□□□ 0.04
LCE6AA0A183 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCE6AA0A183 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCE6AA0A183 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCE6AA0A183 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.3■□□□□ 0.04
LCE6AA0A183 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC15.3■□□□□ 0.04
LCE6AA0A183 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LCE6AA0A183 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC15.3■□□□□ 0.04
LCE6AA0A183 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCE6AA0A183 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.3■□□□□ 0.04
LCE6AA0A183 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LCE6AA0A183 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCE6AA0A183 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCE6AA0A183 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LCE6AA0A183 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LCE6AA0A183 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LCE6AA0A183 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LCE6AA0A183 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCE6AA0A183 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCE6AA0A183 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LCE6AA0A183 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.29■□□□□ 0.04
LCE6AA0A183 AC098590.1-201ENST00000468126 897 ntBASIC15.29■□□□□ 0.04
LCE6AA0A183 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.29■□□□□ 0.04
LCE6AA0A183 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LCE6AA0A183 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCE6AA0A183 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LCE6AA0A183 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCE6AA0A183 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LCE6AA0A183 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCE6AA0A183 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LCE6AA0A183 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LCE6AA0A183 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LCE6AA0A183 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC15.28■□□□□ 0.04
LCE6AA0A183 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LCE6AA0A183 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
LCE6AA0A183 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCE6AA0A183 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.28■□□□□ 0.04
LCE6AA0A183 DUSP5P2-201ENST00000426873 1033 ntBASIC15.28■□□□□ 0.04
LCE6AA0A183 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LCE6AA0A183 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LCE6AA0A183 RPS2P4-201ENST00000476944 856 ntBASIC15.28■□□□□ 0.04
LCE6AA0A183 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.28■□□□□ 0.04
LCE6AA0A183 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.28■□□□□ 0.04
LCE6AA0A183 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.28■□□□□ 0.04
LCE6AA0A183 AC098934.4-201ENST00000564127 592 ntBASIC15.28■□□□□ 0.04
LCE6AA0A183 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC15.28■□□□□ 0.04
LCE6AA0A183 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.28■□□□□ 0.04
LCE6AA0A183 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCE6AA0A183 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC15.28■□□□□ 0.04
LCE6AA0A183 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCE6AA0A183 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LCE6AA0A183 BX005040.4-201ENST00000637145 1518 ntBASIC15.27■□□□□ 0.04
LCE6AA0A183 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCE6AA0A183 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCE6AA0A183 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCE6AA0A183 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.27■□□□□ 0.04
LCE6AA0A183 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.27■□□□□ 0.04
LCE6AA0A183 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.27■□□□□ 0.04
LCE6AA0A183 MIR1224-201ENST00000408193 85 ntBASIC15.27■□□□□ 0.04
LCE6AA0A183 GCSHP5-201ENST00000443090 522 ntBASIC15.27■□□□□ 0.04
LCE6AA0A183 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LCE6AA0A183 AF201337.1-201ENST00000520239 748 ntBASIC15.27■□□□□ 0.04
LCE6AA0A183 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC15.27■□□□□ 0.04
LCE6AA0A183 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.27■□□□□ 0.04
LCE6AA0A183 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LCE6AA0A183 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCE6AA0A183 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms