Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV26-1A0A087WT03 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV26-1A0A087WT03 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV26-1A0A087WT03 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV26-1A0A087WT03 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRAV26-1A0A087WT03 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV26-1A0A087WT03 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV26-1A0A087WT03 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV26-1A0A087WT03 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV26-1A0A087WT03 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV26-1A0A087WT03 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV26-1A0A087WT03 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV26-1A0A087WT03 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV26-1A0A087WT03 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV26-1A0A087WT03 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV26-1A0A087WT03 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRAV26-1A0A087WT03 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.86■□□□□ 0.13
TRAV26-1A0A087WT03 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.86■□□□□ 0.13
TRAV26-1A0A087WT03 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
TRAV26-1A0A087WT03 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV26-1A0A087WT03 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV26-1A0A087WT03 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV26-1A0A087WT03 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV26-1A0A087WT03 AC008406.3-201ENST00000620001 1374 ntBASIC15.86■□□□□ 0.13
TRAV26-1A0A087WT03 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV26-1A0A087WT03 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV26-1A0A087WT03 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV26-1A0A087WT03 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV26-1A0A087WT03 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV26-1A0A087WT03 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV26-1A0A087WT03 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV26-1A0A087WT03 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV26-1A0A087WT03 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRAV26-1A0A087WT03 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV26-1A0A087WT03 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
TRAV26-1A0A087WT03 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV26-1A0A087WT03 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV26-1A0A087WT03 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV26-1A0A087WT03 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV26-1A0A087WT03 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV26-1A0A087WT03 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRAV26-1A0A087WT03 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV26-1A0A087WT03 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV26-1A0A087WT03 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV26-1A0A087WT03 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV26-1A0A087WT03 AC131281.2-201ENST00000520478 145 ntBASIC15.84■□□□□ 0.13
TRAV26-1A0A087WT03 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV26-1A0A087WT03 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV26-1A0A087WT03 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV26-1A0A087WT03 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRAV26-1A0A087WT03 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV26-1A0A087WT03 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV26-1A0A087WT03 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV26-1A0A087WT03 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV26-1A0A087WT03 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV26-1A0A087WT03 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV26-1A0A087WT03 AC009102.2-201ENST00000606772 1639 ntBASIC15.83■□□□□ 0.13
TRAV26-1A0A087WT03 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC15.83■□□□□ 0.13
TRAV26-1A0A087WT03 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
TRAV26-1A0A087WT03 C1orf229-201ENST00000623686 2258 ntBASIC15.83■□□□□ 0.13
TRAV26-1A0A087WT03 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV26-1A0A087WT03 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV26-1A0A087WT03 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV26-1A0A087WT03 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV26-1A0A087WT03 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV26-1A0A087WT03 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
TRAV26-1A0A087WT03 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV26-1A0A087WT03 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV26-1A0A087WT03 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV26-1A0A087WT03 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC15.83■□□□□ 0.12
TRAV26-1A0A087WT03 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV26-1A0A087WT03 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms