Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 LINC01529-204ENST00000636474 1715 ntBASIC20.05■□□□□ 0.8
TRAV27A0A087WT01 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV27A0A087WT01 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRAV27A0A087WT01 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV27A0A087WT01 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV27A0A087WT01 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV27A0A087WT01 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TRAV27A0A087WT01 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV27A0A087WT01 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV27A0A087WT01 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV27A0A087WT01 RARRES2P1-201ENST00000474487 481 ntBASIC20.05■□□□□ 0.8
TRAV27A0A087WT01 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV27A0A087WT01 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV27A0A087WT01 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAV27A0A087WT01 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV27A0A087WT01 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAV27A0A087WT01 CLDN5-201ENST00000403084 2357 ntBASIC20.05■□□□□ 0.8
TRAV27A0A087WT01 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV27A0A087WT01 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV27A0A087WT01 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV27A0A087WT01 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAV27A0A087WT01 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV27A0A087WT01 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV27A0A087WT01 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV27A0A087WT01 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAV27A0A087WT01 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.04■□□□□ 0.8
TRAV27A0A087WT01 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TRAV27A0A087WT01 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV27A0A087WT01 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV27A0A087WT01 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV27A0A087WT01 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRAV27A0A087WT01 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV27A0A087WT01 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV27A0A087WT01 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV27A0A087WT01 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TRAV27A0A087WT01 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV27A0A087WT01 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
TRAV27A0A087WT01 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
TRAV27A0A087WT01 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAV27A0A087WT01 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.03■□□□□ 0.8
TRAV27A0A087WT01 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV27A0A087WT01 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.03■□□□□ 0.8
TRAV27A0A087WT01 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV27A0A087WT01 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV27A0A087WT01 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV27A0A087WT01 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAV27A0A087WT01 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV27A0A087WT01 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
TRAV27A0A087WT01 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV27A0A087WT01 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV27A0A087WT01 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV27A0A087WT01 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV27A0A087WT01 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV27A0A087WT01 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV27A0A087WT01 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TRAV27A0A087WT01 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV27A0A087WT01 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAV27A0A087WT01 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.02■□□□□ 0.8
TRAV27A0A087WT01 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAV27A0A087WT01 Z92544.1-202ENST00000571933 1220 ntBASIC20.02■□□□□ 0.8
TRAV27A0A087WT01 MTDHP2-201ENST00000601468 714 ntBASIC20.02■□□□□ 0.8
TRAV27A0A087WT01 MIR4787-201ENST00000607364 84 ntBASIC20.02■□□□□ 0.8
TRAV27A0A087WT01 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV27A0A087WT01 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV27A0A087WT01 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRAV27A0A087WT01 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
TRAV27A0A087WT01 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV27A0A087WT01 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV27A0A087WT01 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV27A0A087WT01 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV27A0A087WT01 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV27A0A087WT01 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAV27A0A087WT01 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV27A0A087WT01 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.01■□□□□ 0.79
TRAV27A0A087WT01 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRAV27A0A087WT01 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV27A0A087WT01 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV27A0A087WT01 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20■□□□□ 0.79
TRAV27A0A087WT01 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20■□□□□ 0.79
TRAV27A0A087WT01 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRAV27A0A087WT01 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TRAV27A0A087WT01 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV27A0A087WT01 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV27A0A087WT01 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRAV27A0A087WT01 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20■□□□□ 0.79
TRAV27A0A087WT01 AC087742.1-201ENST00000575880 1738 ntBASIC20■□□□□ 0.79
TRAV27A0A087WT01 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRAV27A0A087WT01 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV27A0A087WT01 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20■□□□□ 0.79
TRAV27A0A087WT01 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
TRAV27A0A087WT01 AC080038.3-201ENST00000623346 1952 ntBASIC20■□□□□ 0.79
TRAV27A0A087WT01 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV27A0A087WT01 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV27A0A087WT01 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV27A0A087WT01 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRAV27A0A087WT01 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV27A0A087WT01 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TRAV27A0A087WT01 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV27A0A087WT01 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV27A0A087WT01 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms