Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRAV6A0A075B6T7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV6A0A075B6T7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAV6A0A075B6T7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TRAV6A0A075B6T7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV6A0A075B6T7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV6A0A075B6T7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV6A0A075B6T7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV6A0A075B6T7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV6A0A075B6T7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRAV6A0A075B6T7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV6A0A075B6T7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV6A0A075B6T7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV6A0A075B6T7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV6A0A075B6T7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV6A0A075B6T7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV6A0A075B6T7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV6A0A075B6T7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV6A0A075B6T7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV6A0A075B6T7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAV6A0A075B6T7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV6A0A075B6T7 LINC01971-201ENST00000617888 1048 ntBASIC18.94■□□□□ 0.62
TRAV6A0A075B6T7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV6A0A075B6T7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRAV6A0A075B6T7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV6A0A075B6T7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV6A0A075B6T7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV6A0A075B6T7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV6A0A075B6T7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV6A0A075B6T7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV6A0A075B6T7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV6A0A075B6T7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV6A0A075B6T7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV6A0A075B6T7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV6A0A075B6T7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV6A0A075B6T7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV6A0A075B6T7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV6A0A075B6T7 MIR3960-201ENST00000583311 91 ntBASIC18.93■□□□□ 0.62
TRAV6A0A075B6T7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV6A0A075B6T7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV6A0A075B6T7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TRAV6A0A075B6T7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV6A0A075B6T7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TRAV6A0A075B6T7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV6A0A075B6T7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
TRAV6A0A075B6T7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV6A0A075B6T7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV6A0A075B6T7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV6A0A075B6T7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV6A0A075B6T7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRAV6A0A075B6T7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRAV6A0A075B6T7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV6A0A075B6T7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
TRAV6A0A075B6T7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TRAV6A0A075B6T7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRAV6A0A075B6T7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV6A0A075B6T7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV6A0A075B6T7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV6A0A075B6T7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV6A0A075B6T7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV6A0A075B6T7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAV6A0A075B6T7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV6A0A075B6T7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TRAV6A0A075B6T7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRAV6A0A075B6T7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
TRAV6A0A075B6T7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV6A0A075B6T7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV6A0A075B6T7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV6A0A075B6T7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV6A0A075B6T7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV6A0A075B6T7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV6A0A075B6T7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV6A0A075B6T7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.91■□□□□ 0.62
TRAV6A0A075B6T7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.91■□□□□ 0.62
TRAV6A0A075B6T7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV6A0A075B6T7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRAV6A0A075B6T7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TRAV6A0A075B6T7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV6A0A075B6T7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TRAV6A0A075B6T7 AC010542.4-201ENST00000563151 1910 ntBASIC18.9■□□□□ 0.62
TRAV6A0A075B6T7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV6A0A075B6T7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV6A0A075B6T7 AL157384.1-201ENST00000445995 2473 ntBASIC18.9■□□□□ 0.62
TRAV6A0A075B6T7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV6A0A075B6T7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV6A0A075B6T7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TRAV6A0A075B6T7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV6A0A075B6T7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV6A0A075B6T7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV6A0A075B6T7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TRAV6A0A075B6T7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV6A0A075B6T7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.89■□□□□ 0.62
TRAV6A0A075B6T7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV6A0A075B6T7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
TRAV6A0A075B6T7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV6A0A075B6T7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV6A0A075B6T7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV6A0A075B6T7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
TRAV6A0A075B6T7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV6A0A075B6T7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms