Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDN22Q8N7P3 MOG-225ENST00000431798 1814 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
CLDN22Q8N7P3 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CLDN22Q8N7P3 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
CLDN22Q8N7P3 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
CLDN22Q8N7P3 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.27□□□□□ -0.44
CLDN22Q8N7P3 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
CLDN22Q8N7P3 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC12.27□□□□□ -0.44
CLDN22Q8N7P3 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CLDN22Q8N7P3 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC12.27□□□□□ -0.44
CLDN22Q8N7P3 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CLDN22Q8N7P3 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CLDN22Q8N7P3 AL805961.2-201ENST00000642139 4817 ntBASIC12.27□□□□□ -0.44
CLDN22Q8N7P3 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CLDN22Q8N7P3 DDC-206ENST00000431062 1620 ntTSL 5 BASIC12.27□□□□□ -0.44
CLDN22Q8N7P3 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 MIR769-201ENST00000390225 118 ntBASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 NUP210P1-202ENST00000504322 710 ntBASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 RTN3P1-201ENST00000536295 711 ntBASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 AL161670.2-201ENST00000557650 1227 ntBASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC12.27□□□□□ -0.45
CLDN22Q8N7P3 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 AC092139.4-201ENST00000624318 2794 ntBASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 MIR557-201ENST00000385239 98 ntBASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 OR2W2P-201ENST00000406313 909 ntBASIC12.26□□□□□ -0.45
CLDN22Q8N7P3 AL807761.2-201ENST00000422849 729 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms