Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.05□□□□□ -0.16
SLC1A1P43005 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SLC1A1P43005 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC14.05□□□□□ -0.16
SLC1A1P43005 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC14.05□□□□□ -0.16
SLC1A1P43005 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.05□□□□□ -0.16
SLC1A1P43005 AC103810.3-201ENST00000583567 96 ntBASIC14.05□□□□□ -0.16
SLC1A1P43005 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC14.05□□□□□ -0.16
SLC1A1P43005 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.05□□□□□ -0.16
SLC1A1P43005 AP000553.2-201ENST00000609038 441 ntBASIC14.05□□□□□ -0.16
SLC1A1P43005 AC091812.3-201ENST00000621362 345 ntBASIC14.05□□□□□ -0.16
SLC1A1P43005 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC14.05□□□□□ -0.16
SLC1A1P43005 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.05□□□□□ -0.16
SLC1A1P43005 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC14.05□□□□□ -0.16
SLC1A1P43005 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC1A1P43005 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC1A1P43005 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLC1A1P43005 ACAD11-204ENST00000481970 1891 ntTSL 5 BASIC14.05□□□□□ -0.16
SLC1A1P43005 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC1A1P43005 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC1A1P43005 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC1A1P43005 DDX11L2-201ENST00000437401 1398 ntBASIC14.05□□□□□ -0.16
SLC1A1P43005 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
SLC1A1P43005 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLC1A1P43005 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC1A1P43005 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC14.05□□□□□ -0.16
SLC1A1P43005 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SLC1A1P43005 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SLC1A1P43005 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 AC073862.3-201ENST00000624597 1648 ntBASIC14.04□□□□□ -0.16
SLC1A1P43005 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SLC1A1P43005 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 Z98259.1-201ENST00000564261 1697 ntBASIC14.04□□□□□ -0.16
SLC1A1P43005 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC14.04□□□□□ -0.16
SLC1A1P43005 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC14.04□□□□□ -0.16
SLC1A1P43005 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SLC1A1P43005 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.04□□□□□ -0.16
SLC1A1P43005 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.04□□□□□ -0.16
SLC1A1P43005 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SLC1A1P43005 AC245884.6-201ENST00000515672 1067 ntBASIC14.04□□□□□ -0.16
SLC1A1P43005 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.04□□□□□ -0.16
SLC1A1P43005 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.04□□□□□ -0.16
SLC1A1P43005 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.04□□□□□ -0.16
SLC1A1P43005 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC14.04□□□□□ -0.16
SLC1A1P43005 MIR4525-201ENST00000580000 75 ntBASIC14.04□□□□□ -0.16
SLC1A1P43005 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC14.04□□□□□ -0.16
SLC1A1P43005 AC051619.9-201ENST00000623237 597 ntBASIC14.04□□□□□ -0.16
SLC1A1P43005 LINC00244-201ENST00000625073 613 ntBASIC14.04□□□□□ -0.16
SLC1A1P43005 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.04□□□□□ -0.16
SLC1A1P43005 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 OR2I1P-208ENST00000641137 4948 ntBASIC14.04□□□□□ -0.16
SLC1A1P43005 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC14.04□□□□□ -0.16
SLC1A1P43005 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SLC1A1P43005 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC14.04□□□□□ -0.16
SLC1A1P43005 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC1A1P43005 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SLC1A1P43005 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC1A1P43005 ZCWPW1-208ENST00000490721 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A1P43005 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A1P43005 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC1A1P43005 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A1P43005 PISD-203ENST00000397500 2194 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC1A1P43005 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A1P43005 AC011700.1-201ENST00000610409 2627 ntBASIC14.03□□□□□ -0.16
SLC1A1P43005 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC1A1P43005 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC1A1P43005 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
SLC1A1P43005 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A1P43005 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC1A1P43005 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC1A1P43005 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A1P43005 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
SLC1A1P43005 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC1A1P43005 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms