Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 PTGER4P2-201ENST00000328411 252 ntBASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 AL080243.1-201ENST00000423293 1060 ntBASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 PTGER4P3-201ENST00000458150 252 ntBASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 CISD2-202ENST00000503643 808 ntTSL 2 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 AC106047.2-201ENST00000511723 743 ntBASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 RN7SL596P-201ENST00000582123 288 ntBASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 AL139339.2-201ENST00000608063 657 ntBASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 AC073862.5-201ENST00000624129 2027 ntBASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 AC008040.5-201ENST00000599781 1781 ntBASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
NPIPA3F8WFD2 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
NPIPA3F8WFD2 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
NPIPA3F8WFD2 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
NPIPA3F8WFD2 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
NPIPA3F8WFD2 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
NPIPA3F8WFD2 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC12.27□□□□□ -0.44
NPIPA3F8WFD2 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NPIPA3F8WFD2 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
NPIPA3F8WFD2 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NPIPA3F8WFD2 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.27□□□□□ -0.44
NPIPA3F8WFD2 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
NPIPA3F8WFD2 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC12.27□□□□□ -0.44
NPIPA3F8WFD2 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NPIPA3F8WFD2 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NPIPA3F8WFD2 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.27□□□□□ -0.44
NPIPA3F8WFD2 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NPIPA3F8WFD2 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
NPIPA3F8WFD2 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.27□□□□□ -0.44
NPIPA3F8WFD2 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 DDC-212ENST00000615193 1674 ntTSL 3 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 NRADDP-201ENST00000437305 691 ntBASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 GOLGA6L16P-201ENST00000441780 1299 ntBASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 DDX39AP1-201ENST00000445147 1181 ntBASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 SRP14-204ENST00000558720 780 ntTSL 2 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 FAM187B2P-201ENST00000577135 713 ntBASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 URAHP-205ENST00000610227 398 ntBASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms