Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 VPS26A-203ENST00000395098 2554 ntTSL 5 BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 MYL5-201ENST00000400159 666 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 RN7SKP102-201ENST00000411186 315 ntBASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 AL354676.1-201ENST00000458047 368 ntBASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 AC023194.3-202ENST00000524253 364 ntTSL 3 BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 AC136944.3-202ENST00000567422 509 ntBASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 SAT2-208ENST00000573566 640 ntTSL 2 BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 IGFL4-204ENST00000601672 667 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 AC004080.4-201ENST00000602610 633 ntBASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 RN7SL803P-201ENST00000607433 307 ntBASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 RAB5B-211ENST00000628569 496 ntTSL 5 BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIMBP3Q9UFD9 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 PRPSAP2-228ENST00000610773 1905 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 WASH2P-201ENST00000453662 1684 ntBASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 AC079880.1-201ENST00000603040 2046 ntBASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 TAAR6-201ENST00000275198 1038 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 AKR1E2-202ENST00000334019 1036 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 SCGB2B2-201ENST00000379204 426 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 AC007249.1-201ENST00000404616 494 ntTSL 5 BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 AC019349.1-201ENST00000411759 476 ntTSL 3 BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 ATXN8OS-201ENST00000414504 1148 ntTSL 5 BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 AC117482.1-201ENST00000490933 911 ntBASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 AC108174.1-201ENST00000504916 745 ntTSL 3 BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 AL121578.3-201ENST00000567273 710 ntTSL 3 BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 AL359736.3-201ENST00000626707 303 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 SOX9-AS1-219ENST00000630770 961 ntTSL 5 BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 AC067852.6-201ENST00000591237 1736 ntBASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 LINC00511-202ENST00000457958 1696 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 PDPN-210ENST00000513143 1305 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 OR10N1P-203ENST00000641736 1305 ntBASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIMBP3Q9UFD9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 AC090559.2-201ENST00000366360 430 ntTSL 5 BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 SUPT3H-201ENST00000371458 728 ntTSL 5 BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 CR769776.2-201ENST00000445057 378 ntBASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 RN7SL513P-201ENST00000465715 298 ntBASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 AC022639.1-203ENST00000521958 579 ntTSL 4 BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 CYB5RL-209ENST00000534324 1148 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 AP002383.6-201ENST00000616726 697 ntBASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 GOLGA8VP-201ENST00000559009 1798 ntBASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 AGPAT4-IT1-201ENST00000624499 1878 ntBASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 TARS2-214ENST00000606933 2162 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 CCNYL2-201ENST00000472090 1440 ntBASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 AC073347.1-201ENST00000421633 2643 ntBASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 SF3B6-201ENST00000233468 770 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 SPANXA2-201ENST00000370518 691 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 SPANXA1-201ENST00000370519 691 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 HMGN1P37-201ENST00000413805 303 ntBASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 AC114489.1-201ENST00000421619 395 ntTSL 3 BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 GM2AP1-201ENST00000491450 521 ntBASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 AC004590.1-201ENST00000502435 510 ntTSL 2 BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 AC009630.1-201ENST00000523081 559 ntTSL 2 BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 AC005209.1-201ENST00000579621 289 ntTSL 3 BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 LINC01882-201ENST00000589930 569 ntTSL 3 BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 Metazoa_SRP.171-201ENST00000614579 289 ntBASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 DDX41-219ENST00000629036 606 ntTSL 4 BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 AL160287.1-203ENST00000637960 1061 ntBASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIMBP3Q9UFD9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RIMBP3Q9UFD9 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms