Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 BRD7P5-201ENST00000299197 1822 ntBASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 AC009533.1-201ENST00000539757 3158 ntBASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC112Q8NEF3 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 BX679664.3-201ENST00000414070 555 ntBASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 ACTBP11-201ENST00000436287 1126 ntBASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 CSF2RBP1-201ENST00000447905 391 ntBASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 AC113935.1-201ENST00000471722 555 ntBASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 AP000812.2-201ENST00000538934 718 ntBASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 SHROOM2P1-201ENST00000434773 2384 ntBASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC112Q8NEF3 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC112Q8NEF3 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC112Q8NEF3 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CCDC112Q8NEF3 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CCDC112Q8NEF3 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC112Q8NEF3 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC112Q8NEF3 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC14.91□□□□□ -0.02
CCDC112Q8NEF3 ANGEL2-208ENST00000535388 2517 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC112Q8NEF3 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC112Q8NEF3 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC112Q8NEF3 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC112Q8NEF3 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.91□□□□□ -0.02
CCDC112Q8NEF3 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.91□□□□□ -0.02
CCDC112Q8NEF3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.91□□□□□ -0.02
CCDC112Q8NEF3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC112Q8NEF3 AL354877.1-201ENST00000424412 413 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms