Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC14.07□□□□□ -0.16
SLC1A1P43005 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A1P43005 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SLC1A1P43005 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC14.07□□□□□ -0.16
SLC1A1P43005 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A1P43005 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.07□□□□□ -0.16
SLC1A1P43005 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.07□□□□□ -0.16
SLC1A1P43005 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC1A1P43005 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SLC1A1P43005 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A1P43005 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A1P43005 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SLC1A1P43005 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.07□□□□□ -0.16
SLC1A1P43005 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A1P43005 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A1P43005 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SLC1A1P43005 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SLC1A1P43005 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A1P43005 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A1P43005 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A1P43005 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A1P43005 ENTPD3-203ENST00000445129 1658 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A1P43005 ZNF143-203ENST00000396602 2947 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A1P43005 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A1P43005 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC1A1P43005 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC1A1P43005 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 ZSCAN5DP-201ENST00000600684 1488 ntBASIC14.06□□□□□ -0.16
SLC1A1P43005 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
SLC1A1P43005 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC1A1P43005 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SLC1A1P43005 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SLC1A1P43005 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 AL512430.1-201ENST00000392575 860 ntBASIC14.06□□□□□ -0.16
SLC1A1P43005 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC14.06□□□□□ -0.16
SLC1A1P43005 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.06□□□□□ -0.16
SLC1A1P43005 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC14.06□□□□□ -0.16
SLC1A1P43005 CEP164P1-201ENST00000455142 418 ntBASIC14.06□□□□□ -0.16
SLC1A1P43005 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC1A1P43005 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC1A1P43005 EEF1GP8-201ENST00000506566 1154 ntBASIC14.06□□□□□ -0.16
SLC1A1P43005 HINT1-204ENST00000506908 681 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC1A1P43005 IGHV1-12-201ENST00000518307 205 ntBASIC14.06□□□□□ -0.16
SLC1A1P43005 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC14.06□□□□□ -0.16
SLC1A1P43005 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.06□□□□□ -0.16
SLC1A1P43005 AP001120.3-201ENST00000585729 489 ntBASIC14.06□□□□□ -0.16
SLC1A1P43005 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.06□□□□□ -0.16
SLC1A1P43005 AC005632.3-201ENST00000605544 308 ntBASIC14.06□□□□□ -0.16
SLC1A1P43005 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC14.06□□□□□ -0.16
SLC1A1P43005 LINC00643-207ENST00000637212 734 ntBASIC14.06□□□□□ -0.16
SLC1A1P43005 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SLC1A1P43005 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC1A1P43005 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SLC1A1P43005 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
SLC1A1P43005 C3orf56-201ENST00000624688 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SLC1A1P43005 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SLC1A1P43005 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 ADPRH-202ENST00000465513 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 AC124319.4-201ENST00000622931 2161 ntBASIC14.06□□□□□ -0.16
SLC1A1P43005 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A1P43005 AIFM1P1-201ENST00000413342 1841 ntBASIC14.06□□□□□ -0.16
SLC1A1P43005 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC1A1P43005 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC14.05□□□□□ -0.16
SLC1A1P43005 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC14.05□□□□□ -0.16
SLC1A1P43005 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC1A1P43005 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
SLC1A1P43005 IL18BP-202ENST00000337131 1606 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
SLC1A1P43005 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLC1A1P43005 R3HDM2-215ENST00000634871 4092 ntTSL 5 BASIC14.05□□□□□ -0.16
SLC1A1P43005 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC1A1P43005 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC14.05□□□□□ -0.16
SLC1A1P43005 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC1A1P43005 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC14.05□□□□□ -0.16
SLC1A1P43005 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLC1A1P43005 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.05□□□□□ -0.16
SLC1A1P43005 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.05□□□□□ -0.16
SLC1A1P43005 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC14.05□□□□□ -0.16
SLC1A1P43005 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC14.05□□□□□ -0.16
SLC1A1P43005 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms